Oncorhynchus keta (chum salmon): 118385380
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Entry
118385380 CDS
T09424
Name
(RefSeq) beta-hexosaminidase subunit beta-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00511
Other glycan degradation
oke00513
Various types of N-glycan biosynthesis
oke00520
Amino sugar and nucleotide sugar metabolism
oke00531
Glycosaminoglycan degradation
oke00600
Sphingolipid metabolism
oke00603
Glycosphingolipid biosynthesis - globo and isoglobo series
oke00604
Glycosphingolipid biosynthesis - ganglio series
oke01100
Metabolic pathways
oke04142
Lysosome
Module
oke_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118385380
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
118385380
00513 Various types of N-glycan biosynthesis
118385380
00531 Glycosaminoglycan degradation
118385380
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
118385380
00604 Glycosphingolipid biosynthesis - ganglio series
118385380
00511 Other glycan degradation
118385380
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118385380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oke03110
]
118385380
Enzymes [BR:
oke01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
118385380
Chaperones and folding catalysts [BR:
oke03110
]
Intramolecular chaperones
Others
118385380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
118385380
NCBI-ProteinID:
XP_035628380
LinkDB
All DBs
Position
6:30772454..30787841
Genome browser
AA seq
547 aa
AA seq
DB search
MVATLKFTTLLLAVVVCRATQDYGYKDVEEPTLGDSQYGSLWPLPQKVQMSTVAFKLSGV
SFQIVDAKESSSGASCSLLQNAYRRYDEYIFPISRMQGQNKKKAFASDVSELQVWITSAD
SECDSYPSVTSDESYELSVDSPVAVLKAPKVWGALRGLETFSQLVYEDEYGAKSINRTEI
QDFPRFTHRGLLLDSSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDPSFPYMSRTFPQL
SQQGAYHPYTHVYTPSDVKMIIEFARLRGIRVVSEFDTPGHTQSWGKGQKDLLTPCYSGA
SPSGSFGPVNPILNTTYDFMAMFFKEVSTVFPDAYIHLGGDEVDFSCWKSNPDIQKFMVQ
QGFGTDYSKLESFYIQRLLDIVTTTNKGYMIWQEVIDNGVKLKADTLIHVWKGNQQQYQA
EMARVTASGYQALLSTPWYLNRISYGQDWQAAYKADPQDFNGTDAQKKLVVGGEACLWGE
YVDATNLTPRLWPRASAVGERLWSDKDVKDTNDAYSRLIQHRCRMVQRGIPAEPLFTGYC
AHEYKGV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgacgctgaagtttacaacattattacttgctgttgttgtctgccgggcaacg
caagattatggttataaagatgtcgaggagcctaccctgggcgattctcagtatggatct
ctctggccgttgcctcagaaagtccaaatgtcaacggtagcattcaaactcagcggtgtt
agtttccagatagttgacgcgaaagaatcgtcttccggcgcgagctgcagccttcttcaa
aatgcatatcgaaggtatgacgaatacatattccccatttccagaatgcaagggcaaaac
aaaaagaaggcatttgcctctgatgtgtctgagttacaggtgtggatcacatcagctgac
tctgagtgtgacagctacccaagtgtgacatctgatgagtcatacgaactctcggtggac
tctcctgttgctgtgctgaaagcacccaaggtgtggggtgcgctgagaggtctggagact
tttagccagttggtgtatgaggatgaatatggagcaaaaagcatcaataggacagagatc
caggactttccacggtttacacatcgaggcctcttattggacagctctcgtcacttcctg
cccatcaaagtcatcttagccaatctggaagcaatggcgtggaacaaattcaatgtgttc
cactggcacatagtagatgacccctccttcccctacatgagccgtaccttcccacagctg
agccagcagggagcataccacccgtacacgcatgtgtacacgccctctgacgtgaagatg
atcattgagtttgctcgcctcaggggcattcgtgtcgtctctgagtttgacacccctgga
cacactcagtcatggggcaaaggccagaaggacctactgaccccctgttattctggagcc
agcccctctggctcgtttggaccggtcaaccctatcctcaacaccacctatgacttcatg
gccatgttcttcaaggaggtcagcacagtgttccccgatgcctacatccatctaggagga
gatgaggttgacttcagctgctggaagtccaacccagacatccagaagttcatggtgcag
caaggctttgggacggactacagcaagctggagtctttctatattcagaggctcttggat
atcgtcaccactaccaacaagggctacatgatctggcaggaggtgattgacaatggagtt
aagctgaaggcagacacgctaatccacgtgtggaaaggcaaccagcagcagtaccaggct
gagatggcaagggtcacagcatcaggctaccaggccctgctctccacaccctggtacctg
aaccgcatctcctacggccaagactggcaggccgcttacaaggcagacccacaggacttt
aatggcacagatgctcagaagaagctggtagtcggcggagaggcctgtctgtggggggaa
tacgtggacgctaccaacctgacccccagactctggccccgtgccagtgctgtgggggag
cggttgtggagtgacaaggatgtgaaagacacaaacgatgcttatagtcgtctgatccag
caccgctgtcgcatggtccagcgtggtataccagctgagcctctgtttacaggttactgt
gcacatgagtacaaaggggtatga
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