Oncorhynchus keta (chum salmon): 118385416
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Entry
118385416 CDS
T09424
Name
(RefSeq) scavenger receptor class B member 1-like isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03272
Virion - Hepatitis viruses
oke04145
Phagosome
oke04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
118385416
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118385416
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
118385416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118385416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118385416
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118385416
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118385416
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Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
118385416
NCBI-ProteinID:
XP_035628438
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Position
6:33916427..33942669
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AA seq
496 aa
AA seq
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MNKSKLAIGLFVAGTLTAVFGLVILFVGPIIIDDQIVKNLVIDPENEVSYTIWKDIPVPF
FMSVYFFNILNPTEFLAGENPMVEQRGPYVYRKRLQKQNITFHPNHTVSYLEYRSYFFEP
SMSVGNESDVVTIPNMLVLGAAVMMENMPHAVRLLLSATFKSFKEGPFLSKSVGELMWGY
DSKLVDFLNKWFPGMLPSTGKFGLFSEFNNSNTGMFTVHTGKDDIRLIHKVNSWNGLTKL
IYWKTPQCNMINGTAGQMWPPFMTKESTLPFYSPDACRSLELVYQREGIMKGIPLYRFVA
PKTMFANGSDYAPNEGFCPCRQSGLLNVSSCRSNAPVFISQPHFYNADPVLLDYVQGLQP
TEDEHGLFIDIHPETGVPLNVSIRLQLNLYMKKVSGITETGKISEVVMPMIWFEENGYMD
GAIVKMFHTNLVLLPMVMVYMQYCFLGLGLATVLGAVLLHYSGKVSLKKDLSTVMENHGA
TVKDPVNGTDGHIYHE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctaagttagcaatcggactttttgtcgcaggtactctgactgcagtgttt
gggttagttattttattcgttggaccaatcatcattgacgaccaaatagtaaagaactta
gtaatagaccctgagaatgaggtgtcctataccatttggaaggacatccctgtcccgttc
ttcatgtctgtctacttcttcaacatcctcaaccccactgaattcctggcgggagagaac
cccatggtggagcagagaggaccctacgtatacaggaagcgtcttcagaagcagaacatc
acgttccatcccaaccatacagtgtcgtatcttgaatacaggagctacttctttgagccc
agcatgtcagtgggcaacgagtcggatgtggtcaccatccctaacatgctggtgttgggt
gcggcggtgatgatggaaaacatgccacacgcagtgcgtctgttgctcagtgccaccttt
aagagctttaaggagggacccttcctaagcaagtctgtaggggagctgatgtggggctac
gacagcaagctggtggacttcctcaataagtggttccctgggatgctgccctccactggc
aagtttggcctcttctctgagttcaacaactccaacactggtatgttcaccgtccacact
gggaaggatgacatccggctgattcacaaagtgaactcatggaacggcttgaccaagttg
atatattggaagacgccccagtgtaacatgatcaacggtacagcaggacaaatgtggccg
cccttcatgaccaaagagtccacactgccgttctacagtcctgacgcctgcaggtctttg
gagctggtgtatcagcgtgaggggataatgaaagggattcccctctatcgctttgtggct
cctaagactatgtttgctaatggctcagactacgctcccaatgagggcttctgtccctgc
agacaatctggcctcctcaacgtcagcagctgtcgatccaacgccccagtgttcatttcc
caaccccacttctacaatgctgaccctgtgctgctggactacgtacagggacttcagccc
actgaggacgaacacggacttttcatagacatccaccctgagactggtgtgcctctgaat
gtgtctatccgtctgcagctcaacctgtacatgaagaaggtgtcgggtatcacggaaaca
gggaagatctcggaggttgtgatgcccatgatctggtttgaggagaatggctatatggac
ggtgccatcgtgaaaatgttccacaccaacctggtgctattgccaatggtgatggtgtac
atgcagtactgtttcctaggcctgggcctggccactgttctgggagctgtactactacac
tacagtgggaaggtgtcgttgaaaaaagatctgtctacagtgatggagaaccacggggca
acggttaaagacccagtaaacggcacagatggacacatttatcatgagtga
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