Oncorhynchus keta (chum salmon): 118385566
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Entry
118385566 CDS
T09424
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118385566
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118385566
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
WS_DGAT_C
Motif
Other DBs
NCBI-GeneID:
118385566
NCBI-ProteinID:
XP_052377277
LinkDB
All DBs
Position
6:complement(32347347..32591865)
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AA seq
1629 aa
AA seq
DB search
MDIPLTTPLLLALLLCSLSFVHGAMDSCYDDDEGVPSRCMPKFENAAFNRTIKSSNVCGS
PPEDYCMQTSSTRSCHHCSVSDMGLSHNASLLTDFHTDEEPTWWQSQSMFYRVQHPNSVN
LTLHLGKAFEITYVRLKFYTSRPESFAIYKRTNQDGPWVPYQYYSASCSKTYGKNAKGYI
RPGDDERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTAGV
DCQKCHPFYQDRPWARATGDSANQCMKCNCSGQADACVFDAEQYRSTGSGGRCVDCRDHT
DGPHCERCKENHYRRSPQDLCRPCDCNTIGSVSLQCGAEGMCTCRPSVTGEKCDTCQPGF
HSLSPGGCRSCDCETRGSVGICSTLDGGCHCKDNVEGQACDRCKPGSFNLQENNPAGCIS
CFCFGHSLACRSSNDHAAVNITSDFLEDPDRWSGQFSGGQEYPLLWKEGEVYLLPLSEDD
LGFYRAPEKFLGNHLLSYGQLLSLTFTAEAQCLLPHSVTVLLEGSGITLSADLSPQPGLV
HQPGLAPQHTFTLRLHKEETRLRPFLSAFEFQSLLFNLTAFRISNAGGHNYTSQLSGVTL
ASAAHLSSPVTSSTPPAPWVEVCTCPPGFGGQFCELCAPGYTREVPNRGPLSPCVPCTCH
QHGPCHPETGVCECADFTTGPTCERCLDGYYGNTLIGTTNDCQTCPCPDRTSCAQIMEIG
DVVCTNCPSGQRGTRCELCEDGFHGDPLGLSGLVRQCERCDCNGNVDPNALGVCDHMTGR
CFKCLGHTEGDHCQRCRRGYFGDAMDRTMAGKCKPCDCSPAGTSGLLEDCDPQTGSCQCL
SHVTGGDCGQCSVGFFNLQPGVGCERCNCNPIGSSSAGCHPITGQCVCQPGLEGRLCSTC
RMGFFGFSSRGCRACNCDPMGSRSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQC
EECPVCYGLVKEEAGKLKARLQDLEKLLARFDCRNGSGRQYHVREYHVRQHHERGHQGED
SLPNALEDFLAIQEAKEAFVKQFALLEMSTHTLSAQLHTVATAMNCSASVEEEQEEGWRT
LCRTLADSVSVVRSAQTQLTQATLDLDNMVIPFKMTPVPNRWNSAVNESEILMKSHTEMA
GHIESIATKAFMASNQTYSLLMDLLEDNSIEEYISNLTEQMADMQQMKENLTAQVNETLA
IQLSLEEESAEIMVAFVNLTSSILELSKKMPNPTSGTNQSDPSLKLGANQTEGVELSNRT
SELAFHVQSKGELASKIREEMEPRIQTAHNNLAAVQDMHKLTVQAQGSKVIALSSVVTGK
EVESKAITLRRELEDMQREWPQRQAQTKVALKRERLLREKVLEDVSKKVNQTKRVLRPAL
ESATLSNATAQEAKHTANALSKEAKATLTQGKHTRTLSAQLSSSVDITLQQLAEQENHTV
QAQTQTNAEPVESLASVKVNIQAAKLQLEAYSLTLTQLVSKIDGGMALERFERILSETAV
RLSVLRGSVESPALNGKIHTLRSAAQDQNSQLTHLEQDLQEIRQERDSLKDIALHLPQTC
PQASGIEGH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggatatcccactgaccaccccactcctcctcgccctccttctctgctccctctccttc
gttcacggggccatggactcctgctacgatgacgacgagggtgtccctagccgttgcatg
cccaagttcgagaacgcagcctttaaccgcacgatcaagtcttccaatgtgtgcggttca
ccgccagaggattactgcatgcagacgagctcgacgcgctcctgccaccactgtagtgtg
tcggacatgggcctcagccacaacgccagcctgctgacggacttccatacggacgaggaa
cccacctggtggcagagccagtccatgttctacagagtccagcaccctaactctgttaat
ctcaccctgcatctcggtaaggcctttgagatcacctacgtgcggctcaagttctacacc
agccgaccggagagctttgccatctacaagcggacaaatcaggatggaccatgggtgccc
taccagtactacagcgcctcctgtagcaagacctacgggaagaacgccaagggatatatc
cgcccgggtgacgacgagaggatggcattgtgcacagacgagttcagtgacatctcccct
ttgactgggggcaacgtggccttctctactttggagggacgacccagcgcatataacttt
gaccagagcgccgtgctgcaggagtgggtgacagccaccgacctgctgatctctctggac
aggctcaacactttcggagacgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctctgatttctctgtgggagccaggtgtaagtgtaatggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacacggccggggtg
gactgccagaagtgtcacccgttctatcaggacaggccatgggccagggccaccggagac
tctgccaaccagtgtatgaagtgtaactgcagtgggcaagcggatgcatgtgtgttcgat
gcggagcagtaccgtagcacagggagtggggggcgctgtgtggactgtagggaccacact
gacggaccgcactgtgaacgctgcaaagagaaccactaccgacggtcaccacaggacctc
tgccgcccctgcgactgtaacaccataggttctgtgagtctgcagtgtggtgcagagggg
atgtgtacgtgcagacccagtgtgacgggggagaagtgtgacacctgtcaacccggcttc
cactcgctcagccctggtggctgcaggtcgtgtgactgtgaaaccaggggcagtgttggc
atctgctctacgctggacggcggttgtcactgcaaggacaacgtggagggacaggcgtgc
gacaggtgcaagccaggctccttcaacctgcaggagaacaacccagctggctgcatctca
tgtttctgcttcggacactcattggcctgcagatcctccaatgaccatgcagctgtcaac
atcacttctgacttccttgaagacccagaccgctggtctggacagttctctgggggacag
gagtaccctctgctgtggaaggaaggtgaggtctacctgctaccactcagtgaggatgat
ctgggcttctacagagctccagagaagttcctggggaaccatctcctgagctatggccag
ctcctctccctgaccttcacggccgaggcccagtgcctcctccctcacagtgtcactgtt
cttctggaaggatctggaatcaccctgtcagctgacctttcaccccaacctggacttgtc
caccagccaggcctcgctccccagcacaccttcactctcagacttcacaaggaggagaca
agactgaggccttttctgtctgccttcgagttccaaagtcttctcttcaacctcactgca
ttcaggatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcctccgctgcccacctctccagccctgttacatcctctaccccccctgctccctgggtt
gaggtgtgtacgtgccccccggggtttgggggtcagttctgtgagctctgtgccccaggc
tacaccagagaggtccctaacagaggacccctgtcaccctgtgtgccctgcacctgccac
cagcacggaccctgccaccctgagacaggtgtgtgtgagtgtgcagatttcaccacagga
ccaacctgcgagcgctgcctggatggttactatggcaacacgttgattggcacgaccaac
gactgtcaaacttgcccctgcccggaccgcaccagctgtgctcaaattatggagattggg
gacgtggtctgtaccaactgcccttcaggacagaggggaaccaggtgtgagttgtgtgag
gacggtttccacggcgaccccctgggcctttctgggctggttcggcagtgcgagcggtgc
gactgtaacggtaacgtggatcccaacgcgctgggcgtgtgtgatcacatgacgggccgc
tgcttcaagtgtctgggacacaccgagggagaccactgtcaacgttgtcgacgcggttac
tttggagacgccatggaccggacgatggccgggaagtgcaaaccctgcgactgcagtcct
gcagggacttctgggttgttggaggactgtgacccccagaccggaagttgtcagtgcctt
agtcatgtgaccgggggagactgtggccagtgctcagtcggcttcttcaacctgcagcct
ggagtaggctgtgagaggtgcaactgtaaccccattggctcgtcttccgcggggtgccac
ccaatcacagggcagtgtgtgtgtcagccgggactggaggggcggctgtgcagcacctgt
cgtatgggcttctttggtttctcctcacgaggctgcagagcctgtaactgcgaccctatg
ggttcccgctccatgcagtgccacaccaacggcacctgtccctgccgccagggctttgta
gggtacaagtgtgaccagtgtgagctcaactacttccacaacagagccacgcaccagtgt
gaagagtgccccgtctgctacgggctagtcaaggaggaggcagggaagctgaaggcacgg
ctgcaggatttggagaagctcctggcacgcttcgactgccggaatggctcgggacgccag
tatcacgtgcgcgagtatcacgtgcgccagcatcacgagcgtggccatcagggggaggac
agcctgcccaatgcgctggaggacttcctggctatccaagaggcaaaagaagcctttgtc
aaacagtttgctctcctggagatgtctacacacactctctcagctcagctgcacactgtt
gccaccgctatgaactgtagcgccagcgtggaggaagagcaggaggaagggtggagaaca
ttgtgcaggacccttgctgactctgtgtccgtggttagaagtgcacagacacagctgacg
caggcaactctggacctggacaacatggtcatccctttcaagatgacacctgtgcccaac
cgctggaactctgcggtaaacgaatcagagatacttatgaaaagtcacacagagatggct
ggtcatatagagtctatagcgaccaaagctttcatggcctccaaccagacctactctctc
ctgatggacctactggaggacaactctattgaggaatacatcagcaacctcacggagcaa
atggcagacatgcagcagatgaaggagaatttgacggcccaggtgaatgagactctagcc
attcagctgtcactggaggaggagtctgctgagatcatggttgcctttgttaacctcaca
tcctccatattggagctgtccaaaaagatgcccaaccccacatcaggaaccaaccaatca
gaccccagcctaaaattgggtgccaaccaaacagagggtgttgagctgagcaacaggaca
tctgagctggcgttccatgtccagtctaaaggagaactggccagtaagatcagagaggag
atggagcctcgaatacagaccgcccacaacaaccttgctgccgtacaggacatgcacaag
ctgacagttcaagcccaggggtcaaaggtcattgccctgtcatcggtggtgacagggaag
gaagtggagtcaaaggccattaccctgcggagagaactggaagacatgcagagagagtgg
cctcaaaggcaggcccagacgaaggttgctctgaagagggagaggttgctgagggagaag
gttctggaagacgtcagtaagaaggtgaaccagaccaagcgagtccttaggcctgccttg
gagagcgctaccctctccaacgctaccgcacaagaagcaaaacacaccgcaaatgccctg
tctaaagaggccaaggccaccctaacccagggcaagcacacgaggacattgtctgcccag
ctcagctcatctgtagacataaccctgcagcagctggctgagcaggagaaccacactgtt
caggcacaaacccagacgaacgcagagcctgtagagtctctggccagtgtaaaggtgaac
atccaggcagctaagcttcagcttgaggcctactccctcacactcacacagctcgtcagt
aaaatagatgggggcatggcgctggaacggtttgaacgtatactgagtgagacggcggtg
cggttgagtgttctgcgtggcagcgtggagagcccggccctgaacgggaagatccatacc
ctgcgatcagccgcccaggaccagaacagccagctgacccacttggaacaggacctgcag
gagatcagacaggagagagacagtctgaaggacattgccctgcacctgccccagacctgc
cctcaggcctcgggaatagagggacactag
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integrated database retrieval system