Oncorhynchus keta (chum salmon): 118385977
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Entry
118385977 CDS
T09424
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118385977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118385977
03012 Translation factors [BR:
oke03012
]
118385977
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118385977
Translation factors [BR:
oke03012
]
Eukaryotic type
Release factors
118385977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
118385977
NCBI-ProteinID:
XP_035629162
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All DBs
Position
11:44034385..44039400
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVTLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMVEKGTDEKTLYLTPEQE
KDKSHFTDKETGQEHELIESMPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcagacaggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggtacgagtatgatctccttgattatccct
ccaaaggatcagatctccagagtagccaagatgttggctgatgagtttggcactgcatcc
aatattaaaagcagagtcaacaggctctctgtgctcggagccatcacctctgtacagcag
agactcaaactctacaataaagtgcctcccaacggcttggttgtatactgtggcaccatt
gtgacggacgagggcaaagagaaaaaagtcaatattgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagccttgctg
tcagatgacagcaagtttggttttattgtgattgatggaagtggcgccctgttcggaacc
ctgcagggaaacaccagggaagtgctgcacaagttcactgtggacctacccaagaagcac
ggcagaggagggcagtctgccttgcgttttgctcgtttgaggatggagaagagacacaac
tatgtccgaaaggtggcggagacggcagtcacactttttgtttccaatgacaaggtcaac
gtagcaggcatggtcttggctggttcagctgacttcaagacggagctcagccagtccgat
atgtttgacccgaggctacaagcaaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgagctgtccgcagaagtgctttccaatgttaaattc
attcaggagaagaaacttataggacgatactttgatgagatcagccaggatacagggaag
tactgctttggggtggaagacacactgaaagccctggaaatgggtgctgttgagattctg
attgtctacgagaacctggataccatgagatacatcctgagatgccacggagcagaggga
cttgctatggtggagaagggtacagatgagaaaacattgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactgggcaggagcatgagctgatcgagagc
atgccgttacttgaatggttcgccaacagctataagaaatttggagcctgtctggagatt
gtcactgacaagagtcaagaaggatcccagtttgtcaagggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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