Oncorhynchus keta (chum salmon): 118386029
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Entry
118386029 CDS
T09424
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118386029
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118386029
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118386029
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118386029
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118386029
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
Type II RPTP family
118386029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
Ig_VEGFR-1-like_5th
Ig_5
DUF5849
MpPF26
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
118386029
NCBI-ProteinID:
XP_052382656
LinkDB
All DBs
Position
1:complement(49529309..49815989)
Genome browser
AA seq
1937 aa
AA seq
DB search
MAAGGPPCLSLPALLPLCALLLCLLFTGSHALSPPRFTKVPVDQIGVSGGVVSFVCQATG
DPKPRVSWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENIYECVAENSEGEVNV
NAKLSIIREDLLPTGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPIDPN
ASNGRIKQLRSGALQIENSEETDQGKYECVASNVEGVRYSSPANLYVRVRRVPPRFSIPP
TSHEIMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNSVRESANYTC
VAMSSLGIIEAVAQITVKSLPKPPGIPMVTETTATSVTITWDSGNPDPVSYYIIQYRAKS
PDSKFETMDGITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSEPVETRTGEQAPASPPR
NIQARIISQNTMMVRWDEPEEPNGQIKGYRVYYTMDPSQPMSLWQIHNVQDSIITTIQSL
VASETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTKFQVGAVSDTSIELTWEPAFEK
EGIINFELRYKEGSFGSQVTKTFVPTASYVVEGLRANTEYYFSLAAISNKGIGAFTNEIS
QKTLQAKPSAPPQDIKCSSSSSTTLLVSWRPPPVESQNGALAGYLVRYQVVGAFVEGGGG
GAGEPMEEPAVPPRDGQVLLQKLEKWTQYRVTLAAFTEIGPGPESEPLLCRTDEDVPGAP
PRRVEVEVLNSTALKVMWRSLLPGRQHGQIRGYQVHYVRVENGESRGLPLIKDVMLADAQ
WETDDTAEYEMVIGGLQPDTTYSITVAAYTTKGDGARSKPKLVVTKGAVPGPPYLSVAHD
SETSAVVRWDAPDVMIPGMELQGYRLQFGRKDVSPLATLEFTPQERQYTVASVHRGATYL
FKVQAKSRGGFGEEATAELHVPEQTPQGYPQISESSNVTCCSVELAWSPPVLAERNGDIT
EYTLAYQETGVGGAPRELSLPAIQSSYVLNSLKPNSAYDVKIRAHTSVGPGPYSPPIQYR
TVAFETDVPKNFTVKWVTKTTVLLTWKFAERRFPFRCTIEYNRQKMDVDARLTKALVTSL
RPNTTYEFRVTCQEKTEGGPRHRVVARTAPPILVKKPKLDLYSEPDNILTMGFTPVESKD
IKNFYVVVVPLKKGSGTARHHKNPDEMDLEELLRDITPKRRTRRQLSQADGKKPYITACF
KQLPTTFTLGTEHRHSSCENKPLEPGQEYVFFLLAELNTTAGKMFAASPYTDPVVTPEME
VDPLPIETGGDGLIWVVGPVLAVVFIICIVIAILLYKNRKRKESEPRTKCLLNNAEITPH
HPTDPVEMRRINFQTPDSGLSSPLSDADFDYESMMNHPPIPIAELAEHTELLKANDNLKL
SQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILAPIEGIIGSDYINANYID
GYRKQNAYIATQGPLPETFGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETY
GMTQVTLLDTIELATFCVRTFSLHKVRNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFL
RRVKTCNPPDAGPIIAHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYM
VQTEDQYSFIHDALLEAVACGNTEVAARSLYSYIQKLAQVETGEHVTGMELEFKRLANSK
AHTSRFISANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINSSFIDGYRQQKAYI
ATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMA
EYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFG
QDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQF
SYQAGLEYLGSFDHYAT
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggcggtccaccctgcctttctctgccggccctgctgcccctctgcgctctg
ttgctctgtttgctgttcactggctcccatgccctatcgccaccaaggttcactaaagtt
cccgttgaccagatcggtgtatccgggggcgtggtctcgttcgtgtgccaggcgacggga
gaccccaagcctcgggtgagctggaacaagaaggggaagaaggtcaactcccaacgcatt
gagactatagagttcgatgagggcgccggagccgtgcttcggatccagcctctacgagcg
ccgcgggatgagaatatctacgagtgcgtggcggagaacagcgagggcgaggtcaacgtc
aatgccaagctgtccatcatcagagaggacttgctcccgacaggattccccaacatagac
atgggtccccagctcaaagtggtggagcgcacacggacggccaccatgctttgtgctgcc
agcggcaaccctgatccagaaatcacctggttcaaggacttcctgcctatagaccccaac
gcaagtaacgggcgaatcaaacagttgcgctcaggtgccctgcagattgagaacagcgag
gagacggaccaggggaagtacgagtgcgtggcgtctaacgtggaaggcgtgcgctactca
tcccctgctaacctatatgtgcgagtccggcgcgtgccccctcgcttctccatcccgccc
accagtcacgagatcatgccaggtggcagtgtgaacatcacctgtgtggcggtagggtcg
cccatgccctatgtcaaatggatgctcaactcagaggacctgactccggaggacgagatg
ccggtgggccggaacgttctggaactcaacagcgtgcgagagtcggccaactacacatgt
gtggccatgagcagtctgggcatcatcgaggcggtcgcgcagatcacagtcaagtccctg
cccaagcccccaggcatccccatggtgaccgagaccacggccaccagtgtcaccatcacc
tgggactcgggcaacccggaccctgtgtcctattacatcatccagtaccgcgccaagtct
cctgacagcaagtttgagaccatggacggcatcaccaccacgcgatacagcatcggaggc
ctttaccccaacacagagtatgagatccgtgtttcggccttcaacacgatcggccagggc
ccccccagtgagccggtggagacacgtactggggaacaagcgccggccagtccgccccgc
aacatccaggcccggatcatctcccagaacaccatgatggtccgctgggacgaacctgaa
gaacccaacgggcagatcaaagggtaccgggtgtactacaccatggacccgtcccagccc
atgagcctatggcagatccataatgtccaggatagcatcatcaccaccatccagagcctg
gtggcgtctgagacctacaccatccgtgtcctggcctttacatcggtgggcgatgggccc
ttctctgaccccatccacgtcaaagtgctgcaaggagtccccggacagccaacaaagttc
caggttggcgctgtgtccgacacaagcatcgagttgacctgggaacctgcctttgagaag
gagggaatcatcaactttgagcttcggtacaaagagggcagttttggcagccaggtgacc
aaaacctttgtccccactgcctcatacgtcgtggagggtctgcgagcaaacacagagtac
tacttctctctggctgccatttccaacaaaggcattggagccttcaccaacgaaatatcc
cagaaaaccttgcaagccaagccctcagccccccctcaagacattaagtgcagcagctcc
agctccaccaccctactggtaagttggcgccccccgcctgtggagagccagaatggcgcc
ctagcggggtacctagtgcgctaccaggtggtgggagccttcgtagagggtggaggcggc
ggtgccggagaacccatggaggagccggccgtgccgcccagggacgggcaggtgctgctg
cagaagctggagaagtggacccagtaccgcgtcaccttggccgccttcaccgaaatcggg
ccgggcccagagagcgaacccctgctctgccgcaccgacgaggatgttccaggggctcct
cctcggcgggtcgaggtggaggtgctcaactccacggcgctcaaggtcatgtggcgctcc
ctgttgccggggcgacagcacggccagatccgtggttaccaggtgcactatgtgcgcgtg
gagaacggagaatcgcgtggccttcctctcatcaaggatgtcatgctagccgatgcccag
tgggaaacggacgatacagccgaatacgaaatggtcatcggagggctccagccggacacc
acctactccatcacagtagctgcgtacaccaccaagggagatggagcacgcagcaaaccc
aaactggtggttaccaaaggagcagtgcccgggccgccctatctgtcagtggctcacgat
tcagagacgtcggccgtggtgcgctgggacgcacccgatgttatgatccctggcatggag
ctgcagggttaccggcttcagtttggccgcaaggacgtgtcccccctggctactctggag
ttcaccccccaggagaggcagtacacggtggctagtgtccaccgcggcgccacctacctc
ttcaaagtccaggctaagagccgagggggctttggggaggaggctacggccgaactgcat
gtgcctgaacaaacaccccaaggttacccccaaatcagcgagagctccaacgtgacctgc
tgctcagtagaattggcatggtcgcccccggtgctggcggagcgcaacggggacatcacg
gagtacacgctggcgtaccaggagacgggcgttgggggcgcaccccgggaactcagcctg
cccgccatccagtccagctacgtgctcaacagcctaaaacccaactcagcgtacgacgtg
aaaatacgagcgcacacgagtgtaggtccagggccctacagcccgccgatccagtatcgg
actgtggcgtttgagacagacgtcccgaagaacttcacagtgaagtgggtcaccaagaca
acggtgttgctaacgtggaagtttgctgagaggcggttcccattccggtgcacgattgag
tacaaccgccagaagatggacgtggacgcccggctgaccaaggcgctggtcaccagcctg
cggcccaacaccacctatgagttccgggtcacgtgtcaggagaaaacagagggtggacct
cgccaccgtgtggtcgctaggacagcaccgcccatcctggtcaagaagcccaagctggac
ctctactcggagccggacaacattctgaccatgggcttcaccccggtggaaagcaaggac
atcaagaatttctatgtggtggtggtaccactaaagaagggctcgggaacagcccgacat
cacaagaacccagacgagatggacttggaagagctgctgagggacatcaccccgaagcgt
cgcaccaggcgccagctgagccaggctgacggcaagaagccctacatcacagcctgcttc
aagcagctccccaccacgttcaccctgggcacagagcaccgccacagcagctgtgagaac
aaacctctggagcccgggcaggagtacgtctttttcctgctggccgagctcaacaccacg
gctgggaaaatgtttgcggccagcccatacacggatccagtggtgaccccagagatggaa
gtggatcctctgcccatcgagacgggcggagacggcctcatctgggtggtggggcccgtg
ctggccgtggtcttcatcatctgcatcgtcatcgccatcctcctctacaagaaccgtaaa
cgaaaggagtcagagcccagaacaaaatgtctgctgaacaacgcagagatcacaccccac
catccaacagaccccgtggaaatgagacgcatcaacttccaaaccccagattctggtctg
agcagtcctctaagtgatgccgattttgactatgaaagtatgatgaatcatccacccatc
cctatcgcagagctggctgaacacacagagcttctcaaagccaacgacaacctgaagctc
tcccaggaatatgagtccatcgatccgggccagcaatttacatgggaacattccaacctg
gaggtgaacaagcccaaaaaccgctatgccaatgtcatcgcctacgaccactcccgcgtc
atccttgcacccatcgaaggtatcataggcagcgactatatcaacgccaactacatagac
ggttacaggaagcagaatgcctacatcgcaacgcagggtcctttgcccgagacgttcgga
gatttctggaggatggtgtgggaacagagggcagccactgtggtcatgatgaccagactg
gaagaaaaatcacggatcaagtgtgaccagtactggcccagtcgaggaacagagacctat
gggatgacccaggtgactctactggacaccatagagctggccaccttctgcgtccgcacc
ttctccctgcacaaggtacgaaatggttccagtgagaagcgggaggtacgtcagttccag
ttcacagcgtggcctgaccacggtgtccccgagtaccccacccccttcctggctttccta
cgcagagtcaagacctgtaacccccctgatgcaggccccatcatcgcccattgcagtgcg
ggcgttgggcggacgggctgtttcatcgtgatcgacgccatgctggagcgcatcaagcac
gagaagacggtggacatctacggccacgtgacgctcatgcgctcgcagcggaactacatg
gtgcagacggaggaccagtacagcttcatccacgatgcactgctggaggcggtggcgtgc
ggcaacacggaggtggcggccaggagcctgtactcctacatccagaagctggcccaggtg
gagacgggcgagcatgtcaccggcatggagctggagtttaagcgcctggccaattccaag
gcccacacgtccaggttcatcagtgccaacctgccctgcaacaagttcaagaaccgtctg
gtgaacatcatgccctacgagaccacccgcgtctgcctgcagccaatcagaggcctcgag
ggatccgactacatcaactccagcttcatcgacggatacaggcaacagaaggcttacatc
gccacgcagggcccgttggcagagaccacagaagacttctggaggatgctgtgggagaac
aactctaccatcgtagtcatgctcaccaaactccgagagatgggcagggaaaaatgtcat
cagtactggcccgctgagcgctcggccaggtatcagtactttgtggtggaccccatggct
gagtacaacatgccccagtacatcctccgagagttcaaagtcaccgacgccagggatggg
cagtccaggacagtgcggcagttccagttcactgattggccggagcagggggtgcccaag
tcaggggagggcttcatagacttcataggccaggtgcacaaaaccaaggagcagtttggc
caggacggacccatctctgtccactgcagcgcgggagttggccggactggtgttttcatc
acgctaagcatcgtgctagagaggatgcgctacgagggcgtggtggacatcttccaaacg
gtcaagatgctgcggacacagaggccggccatggtgcagacagaggatgaatatcagttt
tcctaccaggcgggtctggagtacctaggaagctttgatcactatgcaacgtaa
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integrated database retrieval system
