Oncorhynchus keta (chum salmon): 118386057
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Entry
118386057 CDS
T09424
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118386057 (stxbp5l)
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118386057 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118386057 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118386057
NCBI-ProteinID:
XP_052377987
LinkDB
All DBs
Position
7:14450121..14708472
Genome browser
AA seq
1261 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTSHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDT
PYSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKAGEGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISAHVILYRFSKHD
ANTQIVSLEVRLQFDSEDVISPSEAENNPCFSDPSSPQPPGSPGSGTQDSLPCLKVKSRP
VRMPPGYQAEMVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILMCM
GTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDNQV
SMDMERSKSPTSVPYPSSLHYDPRSMPEPVASLRASHCSPVFYLLDNVKGPGRKLSLPTD
LKTDLDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQSAACMEISLP
VSSHTEGGHASRRAMLQQLHGVSMYSHDEHHTTSYNWSERESRENSFSRSRSSSVSSIDR
DTKESVTTLQFGESYGRKGDALPTACLWVGTSLGVVLLLPISIPTEEEERMEEPITMGPS
GTVLMLKGSVLRFAFLDCGGALIQSPYEVWRDPNGPEDPDRPRRRKLINFSPSSSQEACG
DGHLAVVCSEKQAKVILMPTQAVLFTHNITESSFLLRADVVSVCNSVCLACFCANGHIMT
LSLPSLRPLMDINYLPLTDLRIARTFVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQDML
GELFTPIETPEAQNKGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGPMGLENM
KAAAGGVVGDLARARIALDQRGERLGELEERTALMMNSAETFSTHAHQVMLKHKDKKWYQ
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgttgcg
tccccctcgtgcggcagtgcagctggtaccccgacctctcatgcgcccactccccaggat
atccatgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtacgccat
ggcttcccgtaccagcccacctgcctggcctttgatcccgtccagaagatcctggccatc
ggctccagaacaggaggcattcggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacacctgtggaaccttcgccagagacgcccagccatc
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaactagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccaatgggacctccgagccaagaaggttgacttccgaatc
tactacgatgaggctatccattctgtgagctggcatcacgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcacgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctggg
ggtctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaaa
gccatcacagtgctggagatggaccaccctatcgtagagttcctagtactctgtgacacc
ccatactccaacgaggtccaggatccttatgcagtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgagtgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagcggtggcacatggacactaggctcacagacctacccagagatcatcgtcaca
ggacacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaggtgtttgagaagcccaaggcgggagagggtcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttctgcccacgtcatcctctaccggttcagcaaacacgac
gccaacacgcagatagtgtcactagaggtgcgcctgcagtttgattcagaggacgtcatc
tccccgtcagaggcagagaacaacccgtgtttctcggaccccagttccccccagccgccc
ggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagagtcgtcca
gtgcggatgcccccggggtaccaggctgagatggtggtgcagctgcagtgggtggatgga
gagcccccccagcagatcaccagcctggacatcaactctgcctacggcctcctagcgttt
gggaactgtaatggtctaacggtggtggacttccttcagaagacgatcctgatgtgtatg
ggcacactggacctgtacggagccgcagacccataccaacgactcacacgctccccacgc
aagaacagacagtccacctcagacttttgcatgcgtggcctgtctcacttttattcagat
tcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataaccaggta
tccatggacatggagagaagcaagtcacccacctcagttccctacccaagctctcttcac
tatgaccctcgctccatgcctgagcctgtggccagtctgagagccagccactgcagtcca
gtcttttacttactggacaatgtaaagggacccggcagaaagttaagtctgccaacagat
cttaagactgatcttgatcatgtcaatggacattgcactagtcccacctcccagccctgc
tccgtggggaagcctcgcatcacaggggttcccgagggcccgcggctcacccggagaggg
cctggccgaccgcccttccgcaaggcccagtccgccgcttgcatggagatctctttgcct
gtttcctcccacacagaaggtggccatgcgtccaggagggcaatgcttcagcagttgcat
ggagtcagtatgtactcccacgacgagcaccacaccacctcctacaactggagcgagaga
gaaagtagagagaactcattcagtcgctcgcggagctccagtgtgtccagcattgatcgc
gacaccaaggagtcagtgaccacgctgcagttcggagagtcctacggccgtaagggcgat
gctctgcctaccgcctgcctgtgggtgggcaccagcctgggcgtggtcctgctcctgccc
atatccatccccacagaagaggaggagaggatggaggagcccatcaccatggggcccagt
ggtaccgtcctgatgctaaaaggctctgtgttgcgatttgccttcctggactgtgggggc
gctctcattcagagtccctacgaggtgtggcgggaccccaacggtccggaggaccccgac
cggccccgcaggcgcaagctgatcaacttctccccgtcatcctcccaggaggcgtgcggt
gacggtcacctggccgttgtgtgctctgagaagcaggccaaggtcatcctcatgcccacc
caggctgtcctgttcacccacaacatcaccgagtcctccttcctcctgcgggctgacgtt
gtctccgtctgcaacagcgtctgcctggcctgcttctgcgccaacggacacatcatgacc
ctaagtttgcccagtctaagacccctgatggatatcaactatcttcccttgaccgacttg
cgtatcgcccggacctttgtcttcactaacggaggtcaggccctgtatctgagctctcct
acagagatacagcgtctcacatacagccaggagatgacggacaacctacaggacatgctg
ggggagctgttcactcctatagaaacaccagaggcccagaacaaaggattcctcaaaggc
ttctttgggggcaacgcccagaccttcgacagagaggagctgtttggggaggcagcagcg
ggaaaggcctctcggagtttggcccagcacatccctggtccaatgggattggagaacatg
aaggctgcagccggcggcgtcgtgggggacctggcccgagctcgcatcgccctggaccag
agaggagagagactgggcgagctggaggaacgcaccgccctcatgatgaacagcgccgag
accttctccacacacgcccaccaggtgatgctgaaacataaggacaagaaatggtatcag
ctttaa
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