Oncorhynchus keta (chum salmon): 118386087
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Entry
118386087 CDS
T09424
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118386087
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118386087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Sde0182_C
DUF4577
Motif
Other DBs
NCBI-GeneID:
118386087
NCBI-ProteinID:
XP_035629385
EnsemblRapid:
ENSOKEG00005011543
LinkDB
All DBs
Position
7:16456237..16460960
Genome browser
AA seq
975 aa
AA seq
DB search
MMCGILTGWHGWIFGLQMLFFSLAESEGNTLKYQTNEEGSPGTVIGNLAKDMSLSPSFGS
NTNFRMMKQFNDSFIRVRESDGELSVGERIDRERICRHTLQCLITFDVVSFSKERYKLIH
VEVEVKDINDNSPEFPNKESTVEISENADVGFRIHLDPAEDADVGSNYIQSYQISVNSHF
SIDVLLRADGVKYAELVLMKELDRETQSSYAVELIATDGGNPYRSGSTKITIKVTDFNDN
RPVFDQNNFSVTLPENAQVGFVLLNLNAVDPDEGLNGEVGYGFGKQVSAEIRELFEVDSK
SGRVRLKNPVDFETKKTYELDVQATDLGSNPTPAVCKIIIHIEDVNDNAPEISITPMTSI
STGIAYISETADKDSLVALISTSDRDSGVNSQVHCTLYGHDHFKLQQAYEDSYMIVTAAF
LDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKPIYEVSVVENNAPGA
YITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMKHLE
VHIQASDEGSPQLQSSAIINLKILDQNDNAPSIIEPILNKGSAEIFLPKDAPAGYVVTQI
KATDAEEGINAQMSYKITEGGHLGFSINKVTGKIHVTHELNYDPSETLRVLVAVNDNGTP
SLTSTATIHLTLIEGTPPSVPARVQNDSVEVFEWDIAIIIVLSGSCSLLLLAIILITTTC
SRRKRVKLEAGYSENEDMPHVEKGESRQIDSLITNHKSNVFDVHPFPGKAPLASSNTIKT
APDDGRQVKECVFDNRIMEGNSEGYSTLPGYRKETLRPITIWKGNSFTTISARDPQFSGK
DSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSECKILGHSDRCWSPSATRAKTSLS
HGPHLSTFSKTASLPRNTLQRDSYYQQAHLPKINGLQSVYEKVQHQELDYILVCPPTPAR
ILETDEISLPEYGQS
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggcattttaacaggttggcatgggtggatttttggattacaaatgttattt
ttttcactagccgagtctgagggaaatactctgaaataccagaccaatgaggagggaagt
ccaggaacagtgatcggtaacctggccaaggacatgtccttgagtccctcttttggctcc
aatactaatttcaggatgatgaaacaattcaacgattcttttatccgggtgagagaaagc
gacggggagctttctgtcggggagaggattgacagagagagaatctgtaggcacacttta
cagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaaattgatccat
gtcgaggtggaggtaaaagacatcaatgataactctccggagtttccaaacaaggaatct
acagttgagatctctgaaaatgccgacgtggggttccgtattcatttggacccagccgag
gacgcagatgtcggttcaaactacatccaaagctatcagatttctgtcaacagtcatttt
tcaattgatgtgcttttgagagcagatggggttaaatatgcggagttggtgctaatgaaa
gagctagacagggagactcagtcatcttatgcggtggagcttattgccacagacggagga
aacccttataggtcgggttcaacgaaaataacaataaaagtgacagactttaatgacaac
cgtcctgtttttgaccagaataatttctcggtaactttgcccgagaacgcacaggttgga
ttcgttttattgaacttaaatgcagttgatccagatgagggtttaaatggagaggtgggc
tatgggttcggaaaacaggtttctgcagaaatcagagaacttttcgaagtggacagtaaa
tccgggcgcgtgagacttaagaacccagtggattttgagaccaagaaaacatatgaatta
gacgttcaggcgactgatctaggatccaacccgacccccgccgtctgtaaaataataatt
catatcgaagacgttaatgacaatgccccagaaatcagtattacgccaatgacctccatc
tcaacaggcatcgcatatatcagcgagacagcagacaaggacagcctagtggcgctgatc
agcacctcggacagggactcgggcgtcaatagccaggtccactgcactttatatgggcac
gatcatttcaaacttcaacaggcttatgaggacagctacatgattgtcaccgcagcattc
ctagacagggagaagattagtgagtacaatttaacagtgatggctgaagattttgggtca
cctccattgagaaaaatcacacaatacaccatcaggctaagcgacgagaatgacaacgcc
ccacactttactaagcctatctatgaagtttctgtggtggaaaataatgcaccaggggca
tatataaccacggttgaagccagagatgcagacttggggactaacggcaaaattacatac
agacttttagacagtgttataatgggatcacctgtcaacacgtttgtatctctgaatgca
atctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaacatctggag
gtacacatccaggcaagtgatgaggggtcaccccagcttcagagcagtgccatcatcaat
ctaaaaatattggatcagaatgacaacgctccgtctatcatagagcccatccttaataag
ggatcagctgagattttcctgcccaaagacgcacctgcaggctacgttgtcacccagata
aaggccacggatgctgaagaaggcattaacgcgcagatgtcctacaaaatcacagagggg
ggacacttgggtttctctatcaataaggttactgggaagatacatgtgactcatgagctg
aactatgatccgtctgaaacactgagagtcctagtggctgtcaatgacaatgggacacct
tctctgacctccacagccactatacacctcactctcatcgaaggcactcctcccagtgtt
cctgctagggtccaaaacgacagtgtggaggtctttgaatgggacatagccattatcata
gtcctatcagggagctgctccctcctcttgctagccatcatcttaatcactaccacctgc
agtcgacgtaaacgggttaagctagaggcgggatacagtgaaaatgaagacatgccacac
gtggagaagggggagagcagacaaattgattcattgatcaccaaccacaaaagcaatgtg
tttgatgtgcaccctttccctgggaaagcaccgttggcctcaagcaacacaataaaaaca
gctcctgatgatggaagacaagtaaaggagtgtgtctttgacaacagaataatggagggt
aattcggagggttattcgacactgcctggctataggaaagaaaccctcagacccataacc
atatggaagggtaattcattcacaaccatctccgcgcgagatcctcagttcagtgggaag
gacagtgggaaaggagacagtgactttaacgacagcgactctgacatcagtggagatggc
cacaaaaaagactccccaccgataaacagtctctgggcctgcaccagtgagtgtaaaatc
ctaggccactcagaccgatgctggagcccctctgccactagagccaagaccagcctctcc
catggaccacacctctcaaccttctccaagacagcctctctgccgcgaaacactctgcaa
agagactcctactaccaacaggctcacctacccaaaatcaatggtctgcaaagtgtctat
gaaaaagtccagcaccaagaattggattatattctggtatgtccaccaacaccagccagg
atactagagactgatgagatatccctcccagaatatggacagtcctaa
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