Oncorhynchus keta (chum salmon): 118386157
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Entry
118386157 CDS
T09424
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118386157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118386157
Spliceosome [BR:
oke03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
118386157
Complex B
118386157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
RRM_MUD2_C
xRRM
Motif
Other DBs
NCBI-GeneID:
118386157
NCBI-ProteinID:
XP_035629528
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All DBs
Position
1:complement(44858340..44861091)
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AA seq
279 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRVKGPEAAGA
KKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGMPP
GAMLPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctcaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgccattttctcccagtttggtcaaatc
cttgacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgctctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tacgtggagcgcgaccgcaagaaggagaagagggtcaagggcccagaggctgcaggggcc
aagaagggtgtgccaggaacccctgtagtacccatggggcctggagttccaacacccatg
cctggaatgccacccatgagcggggctcctcgtatgatgcaaatgccagggcagccccct
tacatgcccccgccagggatgatgccacctcctgggatgggccctggggggatgccccct
ggtgctatgcttccgggtgggatgatgccagggcaaatgccccacgcccaggttgcagaa
aaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgagctcatg
ctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtttggtacctggtcgc
cacgacatcgcctttgtagagtttgataatgacgtgcaggctggagcggccagggaagct
ctacagggcttcaagatcacccagaccaacgccatgaagatctcattcgccaagaaataa
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