Oncorhynchus keta (chum salmon): 118386301
Help
Entry
118386301 CDS
T09424
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118386301
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118386301
Endosome - Golgi transport
Rab GTPases and associated proteins
118386301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
118386301
NCBI-ProteinID:
XP_035629840
LinkDB
All DBs
Position
7:complement(31158158..31176631)
Genome browser
AA seq
1143 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFILQRRRGHGDSGGKFTGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWTIACGAAVEDMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGKQAAQEEDPEKFREVLLKFELRFGLPSSEKLVTTYSCCCWKGRVPRHGWLYL
SINHMAFYSFLLGKEVKFVIPWVEVTRLEQVSTGLMTDMVRVTTRRRQRDFSMFLSLDEA
FGVMGQLADIALRRLLDSGGLELDQVLQQSSNITKRVLEEQALRAYVLALFRLPRAECLQ
EVALCSVWTPHARCHTAGTLYTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDSLMSRLRALQWKHSMFHSKKSLTSSSPYYTFYYDT
MYCDGEEIEERALRHTVNTEALMAYYHHSQPDLNNSTATMEQVKERLWDDHFSAYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDSSSELASHPDYYSGLVTESIGHSSLATEEIE
RDLHRSLPDHPAFQNVTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFW
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIQERLPELAEHIPDLSPLSSLSLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANAAALCASADDGQALMILTGFLDHV
KYDENPSPPAPHPPSSPRGEEECSTTVELHTLITDLIIDSYEKFGDLTVRRLERLRCRHR
IQVLQAHEDITKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGSTTVALQHHD
PGQPYVEQYRVDRAQFKSLYVLLVPWLCGLHTDTVAHRTFTLLDQDRDLLITFRKFAGWL
DTLYCEELNEKIRLLYRLHIPPALTESEDDSPPLKSPLLSTTRPLHIEMPNAPVCVHVEE
EIRDYQEQLKQMLKDLAQEKNVEKPLPLMNQREFIQFCKTLYSMFHGNPDENELFQAIAT
VTSLVLQIGEVGHRSRSEVSSEGGAGDEVEEDHREGSQEDHPVFSTKEGDGERQEGTRKS
SERSESSSEWTVSYAQILASLLTEQQLVNFFEKPLDLSAKVAVAKVKQYHERAGLLMLQQ
GTS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccagaggaagttttgctgaaaaacgcgctgaagctttgggttaccgaa
aaatctaacgatttcttcattttgcagcgccgaagaggacatggggattcagggggaaaa
tttacaggtcttctggtgggggctctggacacagtgctggactccaacgcccgggtcaca
ccattccgtatcctgctacaggtgcctgggtcacaggtcagctggactatagcttgtggt
gctgctgttgaggacatgaacaggcattgggactggctggtccagaatctactccactct
ctctcagtatttgagaacaaggaggatgtcgccagcttcgtcaaagggaaagtcaagggt
ctgatagcagaggaggtgagggggaagcaggcggctcaagaggaggacccagagaagttc
cgggaggtactgctgaagtttgagctgcgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaagggacgcgttccccggcatggctggctctacctc
agcatcaaccacatggccttctactccttcctgctgggaaaggaagtgaagtttgtgatc
ccgtgggtggaggtgacgaggctggagcaggtctccactggcctcatgacggacatggtg
cgtgtgacaacgcggcggcgccagcgggacttctctatgttcctgagcctggatgaggcg
ttcggggtcatgggtcagctggctgacatcgcactgcgacgcctgctggacagcggaggt
ctagaactggatcaagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcattgagggcgtacgtcctggctcttttccggctaccgcgggccgagtgtctccag
gaggtggctctgtgttcagtgtggacgccccatgcccgctgccacacagctggaacactc
tacaccaccgacagctacctatgtttcgccagtcgagaggagggccactgcagcctgctc
atccccctttcagaggtgatctccatagagaaggctgagagcaccagcctgctgcccaac
ccagtgatcgttagtgtgaggagtaagaaggccttccagctgatcgagctgcaggacaga
gacagcctggtggatagtctgatgtcacggctcagagccctgcaatggaaacactccatg
ttccacagcaagaaatctctgacgtcctcgtctccctactataccttctactatgacacc
atgtactgtgacggggaggagatcgaggagagagcactacgtcacacagtgaatacagag
gctctgatggcatactaccaccactctcaacctgacctcaacaatagcacggctaccatg
gagcaggtgaaagagcgtctgtgggatgaccacttctctgcgtatggtcgaggtgtccac
atgttccgcacagagaagatccagaagctggttgccatgggaataccagagtcgctacgg
ggagagctatggatgaccttctctgactcatcgtcagagttggcttcccacccagactac
tactcggggctggtgacggagtctatagggcacagcagcctcgccacggaggagatcgag
agagatctgcaccgctcgctgcccgaccaccccgccttccagaacgtcacgggcatcgct
gccctacgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggttactgccag
tcaatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctgg
ctgctggtggctgtgtgtgagagaatgctgcctgactatttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccaggagcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccctctccctgtcctggttcctcaccctc
ttcctcagtgtgcttcccttccgcagcgccgtctgtgtggtagactgcttcttcttccac
ggcatcaaagccatcttccagctagggttagctgtgctggatgcgaacgctgcggcactg
tgtgctagtgcagatgacggccaggccctcatgatcctcactggctttctggaccacgtg
aagtacgatgagaatccgtctccacctgcccctcaccctccctcgtctccgaggggggag
gaggagtgcagcacgactgtagaactacacaccctgatcacagacctcatcattgactcc
tatgagaaatttggagacctgacggtgagacgattagagcggttgcgatgcagacaccgg
atccaggttctccaagcacacgaggacatcaccaaggagaacgctctcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgatctcttcaagacagag
cacttcatcaacctgtactggggtgatgggagcaccactgtggctctccagcaccatgac
ccaggccagccctatgtggagcagtacagagtggaccgtgcccagttcaaaagcctgtac
gtgctactggttccctggctgtgtggcctccacactgacaccgtggcccaccggaccttc
acactgctggaccaggacagagacttactcatcaccttcagaaagtttgccgggtggctg
gacacactatactgtgaggaactgaatgagaagatcagacttctgtatcgtttgcacata
cctccagctctgactgagagtgaggatgactctcctccactgaagagccctctgctgtcc
actaccagaccactccatatagagatgccgaatgctcctgtgtgtgttcatgttgaggag
gagatcagagactatcaggagcagttgaagcagatgttgaaggacctggctcaggagaag
aatgtggagaaaccgctacctctaatgaaccagagggagttcatccagttttgtaagacc
ctctacagcatgttccatggcaacccagacgagaacgagctctttcaggccatcgctaca
gtgaccagcctggtgctgcagatcggtgaggtcggccaccgcagccggtcagaggtcagc
agcgagggcggggccggagacgaggtagaggaggatcacagggaggggagtcaagaagac
caccctgtcttcagcaccaaagaaggagatggagagaggcaggaggggaccaggaagagt
tccgagcggtctgagagttcgagcgagtggacggtcagctacgctcagatcctggcctcg
ctcctcacagaacagcagctggtcaacttctttgagaaaccactggacctctcagcaaag
gtggctgtagcaaaggtgaaacagtaccatgaaagggccggtctgcttatgcttcagcaa
ggaaccagctga
DBGET
integrated database retrieval system
