Oncorhynchus keta (chum salmon): 118386320
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Entry
118386320 CDS
T09424
Name
(RefSeq) glutamate receptor ionotropic, kainate 4-like isoform X1
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118386320
04082 Neuroactive ligand signaling
118386320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118386320
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
118386320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118386320
NCBI-ProteinID:
XP_052381942
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Position
1:complement(45315468..45756462)
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AA seq
970 aa
AA seq
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MLAAWAPLLLLAMWVRCSSAGPLSFRIAAILDDPMECSRGERLAITLAKDSINRSSNRST
TGKLEVDIFELLRDSEYEMGETMCQILSKGVVGVLGPSASPASNSIISNICGEKEVPYVK
VAPEDILKVQFPRFTTLDLRPTNTDISLAVAGLLTFFNSTTACLICAQADCLLNLERLLR
QFLISKETLSVRMLDDSQDPTPLLKEIRDDKTATIIVDANATMSHIILERASELGMLSVY
YTYIFTSLEFSLLRLDDVPSERVNILGFSVFNRTHPFFQDFLLSLNRSWQENCDHAPFAG
TPLSSALLFDAVHAVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLT
GHIEFNSKGQRSNYALRIMQNSRDGLRQIGQWHSEQGLSMERKLPSINVTDTLFNTTLTI
TTILENPYVMLRPNHQEMEGNERYEGFCVDMLKELADILKFKYCINLVGDGVYGVSGTNG
TWTGMVGELISRKADLAVAGLTITAEREKVIDFSKPFMTLGISIMYRVHLGRRPGYFSFL
DPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYNPHPCLKGRCNLLINQYSLGNSFWFP
VGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLA
DQTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMHSKQPSVFVKSTEEGIARVVNSNYAY
LLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVYRDEFDLAILKLQEDNRLEILK
RKWWDGGKCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAIFMAVLEFMWFLRQTPGTELS
VCEEMLRELQGIVLCRDSLQLRRRRGTTMLRPRPLPLEERRRAAAVSLSNGKLCGAAAGL
PLSEPFSHRLAQEAALVARGCSHIRICPECRRFQGLRGMRPGGGPSHGASPTHSEESIEW
EKTTNSSEPE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagcctgggcgcctctgctcctcttagccatgtgggtgagatgttcctccgct
gggccgctctccttcagaatagccgccatacttgacgacccaatggagtgcagccgggga
gagagattggccatcactctggcgaaggacagcatcaaccggtccagtaaccgttccaca
acaggcaagctggaggtggacatctttgagctgctgagagacagtgaatatgagatggga
gagaccatgtgccagatcctgtccaagggagtggtgggagtcctgggtccctccgccagc
cctgcttccaattccatcatcagcaatatctgtggagagaaagaggtgccctatgtgaaa
gtggcccctgaggacattctgaaggttcagttcccccgcttcaccaccctagacctgcgc
cccaccaacacagacatcagcctggccgtggctggcctgctcacctttttcaacagcact
acagcctgcctcatctgtgcccaggccgactgcttattaaatctggagagactgttacgc
cagttcctcatctccaaggagacactatcggttcgcatgctggatgacagccaggatccc
acaccccttctcaaggagatccgcgatgataagactgccacaatcattgtggatgctaac
gcaacaatgtcccacataattttggaaagggcgtcggagctgggcatgctgtccgtctac
tacacctacatcttcacctcgctggaattctctctgctgcgattggatgacgtgcccagt
gagcgggtgaacattctgggcttttccgttttcaaccgaacacatccatttttccaggat
ttcctcctcagcctcaaccgttcctggcaggaaaactgtgaccacgcccccttcgccggc
acaccgctctcgtcggcgctgctgtttgacgcagtgcacgcggtggttgcggcggtccag
gagctcaaccgtagccagaacgtgggcgccacgcagctctcctgcaagtcctccaagatc
tgggagcatggcaccagcctcatgaactacctgaggatggtagaattggaaggactaacg
ggccacattgaattcaacagcaaaggccagcggtccaactacgccctacggatcatgcag
aacagtagagacggcctaaggcagattggccagtggcactccgagcagggcctgtccatg
gagaggaagcttccatcaatcaacgtgaccgacactctcttcaacaccaccctcactatc
accactattctggagaacccttacgtgatgctacgaccaaaccaccaggagatggaaggg
aacgagcgctatgagggcttctgtgtggacatgctgaaggagctggcggacatcttgaag
ttcaagtactgtatcaatctggtgggggacggggtgtacggggtatctgggaccaacggt
acctggacgggcatggtgggagagctcatctcaaggaaagcggacctggccgtagcgggg
ctcaccatcaccgcagagagggagaaggttatcgatttctccaagccttttatgactctg
ggaatcagcatcatgtaccgtgtgcacttggggcgcagacctggctacttctccttccta
gaccctttttcccctggggtgtggctctttatgctgctagcctacctggcagtcagctgt
gtgctctttctggttgccagactcaccccttacgagtggtacaatccccacccctgcttg
aaggggcgctgtaacctcctcatcaaccaatactcgctgggcaacagtttctggttcccc
gtgggggggttcatgcagcaggggtccaccatcgccccccgcgccctctccacgcgctgc
gtcagtggagtatggtgggcgttcaccctgatcatcatctcgtcctacacggccaacctg
gctgccttcctcactgtccagaggatggaggtgcccattgagtcagtggacgacctggct
gaccagacggccatcgagtatggcaccatgcacgggggctccaccatgaccttcttccag
aactcgcgctaccagacgtaccagcgcatgtggaacttcatgcactccaagcagcccagt
gtgtttgtgaagagcacagaggagggcatcgcccgcgtggtcaactccaactatgcctac
ctgctagagagcaccatgaacgagtactaccggcagcgcaactgtaacctcacccagata
ggaggtctgctggacaccaagggctacggcatcggcatgccagtggggtcagtgtaccgg
gatgagtttgaccttgccatcctcaagctgcaagaagacaaccgtctagagatcctgaag
aggaaatggtgggatggtggcaagtgtccaaaggaggaggatcaccgtgccaaaggacta
ggcatggaaaacataggcggtatcttcgtggtgctggtgtgcggtctcctggtggccatc
ttcatggcggtgctggagtttatgtggtttctgcggcagacgcccggaacagagctgtcg
gtgtgtgaggagatgctacgggagctgcaggggatcgtcctgtgccgggacagcctacag
ctgaggcgtcggcgggggacgaccatgctccgtcctcgccccctacccctggaggagcgc
cggcgggctgctgctgtcagcttgagcaatggcaagctgtgtggcgctgccgccggcctg
cccctctccgagcccttctcccacagactggcacaggaggcagctctggtggcgcggggc
tgcagccacatccgcatctgccctgagtgccggcgcttccaggggctgcgtggcatgcgt
cccgggggcggccccagccatggggcctcgccgactcacagcgaggagagcatagagtgg
gagaaaacgaccaacagtagcgaacccgaataa
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