Oncorhynchus keta (chum salmon): 118386322
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Entry
118386322 CDS
T09424
Name
(RefSeq) sorting nexin-4-like isoform X1
KO
K17919
sorting nexin-4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118386322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118386322
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118386322
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118386322
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
118386322
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
118386322
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118386322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
ParD_antitoxin
Motif
Other DBs
NCBI-GeneID:
118386322
NCBI-ProteinID:
XP_035629878
LinkDB
All DBs
Position
7:33212368..33228107
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AA seq
436 aa
AA seq
DB search
MMADSGPKEVAVIGNTELTSAELDNNIKNTMVEIEKGTSLLRKMEISVAEAEKRTGKNTV
NMQEMYTVYLIETRPVDALTEGITPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKRAE
IVWHKLSADNMDPDFVERRRVGLENFLHRVASHPVLCNDNIFYIFLTEQDKDWKEMVYET
GFQAKADSRLKAVNAAFRVKNPDGRFTELKHYSDELQTVLSQLLRVRARVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTDAL
RAVCRKHELTQFELEMVALDLACKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREAK
LQVLEQQLKEGEDAVKEKNTESDEFVKTAWVDIERFKDQKDRDLKEALISYAVMQISMCK
KGIQVWTNAKECFNKM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactccggacccaaggaagtagcggtgatcgggaacaccgagctcacctcg
gcagaactagataacaacattaaaaacacgatggttgagattgaaaaagggacgagtctt
ctacgaaagatggagatcagcgttgcagaggcagagaaaaggactgggaagaatacagtc
aacatgcaggagatgtacactgtttatctaattgagacacggccggttgatgctctgaca
gaaggtataaccccagactccttatggcgaagatacagcgagtttgagcttctcagaaac
tacctgttggtcacctatccctttgtcgttgttgccccattacctgagaagagggcagag
attgtgtggcacaagctgtcggcggacaacatggacccagactttgtggagaggagaagg
gttggactggaaaacttcctgcaccgagtcgcctcccacccagttctctgcaatgacaat
atcttctatatcttcctcactgagcaggataaagattggaaggaaatggtgtacgagaca
ggatttcaagcaaaggctgattccaggttgaaagctgtgaatgcagcattcagggtgaag
aatccagatggaaggtttacagagttgaaacactacagtgacgagctacagactgtactc
tcccagctgctgagagtgcgggcgagggtagcagatcgactgtatggggtgtacaaagtg
catggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatgggagat
ggactacaaagtgctggccatcacatggatgcgtatgctgcttctgtagatgatattctg
gaggaagaggagcactatgctgatcagctgaaggagtacctgttctatactgatgcacta
agggcggtatgcagaaagcatgagttgacacagtttgagctggagatggttgcactggac
ctagcctgtaagaaacagcagaaggaggaactggtcactgggactgtgcggacgttctca
ctgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggctaag
ttacaagtgttagaacagcagctaaaggagggagaggacgctgttaaagagaagaacacc
gagagcgatgagtttgtgaagactgcctgggtagacattgaacgctttaaggaccagaag
gaccgggacctgaaggaggccctaattagctatgcggtcatgcagatcagcatgtgcaaa
aagggaatacaagtgtggaccaacgcaaaggagtgtttcaacaagatgtga
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