Oncorhynchus keta (chum salmon): 118386346
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Entry
118386346 CDS
T09424
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118386346 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118386346 (si:dkey-13n15.2)
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118386346 (si:dkey-13n15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
118386346
NCBI-ProteinID:
XP_052335225
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All DBs
Position
25:complement(38566030..38612675)
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AA seq
1349 aa
AA seq
DB search
MDIPAANQSYGHGGQPGVCHNAWSATTPPTGLGCTTAQGLSSDPLPSLQGLNLGPASHQS
PSNNIPQSMAQLQYSHQGCLSSLPTTPFRNQSPSALIPCLNQEPHIPHVHMGNYISYNIP
PPSTLVPLKQGPPASGPPSTIPSSNQGPQNTVSPPVSSSSPYPPYPSSNQGPQNTVSPPV
SSSPPYPPYPSSNQGPQNTVSPPVSSSPLYPPYPYANQGFVNGPPVTLTSPNQGFVNGPP
VTLTSPNQGFVNGPPVTLTSPNQGFVNGPPVTLTSPNQGFVNGPPVTLTSPNQGFVNGPP
VTLTSPNQGFVNGPPVTLTSPNQGFMNGPPVTLTSPNQGFMNGPPVTLTSPNQGFMNGPP
VTLTSPNQGFVNGPPVTLTSPNQGFVNGPPVTLTSPNQGFMNGPPVTLTSPNQGFMNGPP
VTLTSPNQGFMNGPPVTLTSPNQGFVNGPPVTLTSPNQGFMNGPPVTLTSPNQGFMNGPP
VTLTSPNQGPPNSRFSSMSPCGSQSQQCSHPYPPQLTSPVQQQPQWVLAQQHYSHSGVMY
KPGATSHPVQEDTTMQPSCPSLGDSGVSGPSSPISESRYGLHPQLLPSAVRMMEEDRTVW
EGKVFVSEPISSLPPLATTDCVMEDRGNCSPRFILSTSYCVPCEGQTALQSHLPLGALVS
PLAKLHTGERPLSVCMEADTVKGCGECGAYMCSAMGWQDCGQRFYCPFCGKLREVGWQHY
QPTQGVEGNRVDREQRPELSLGSYEILDSQQDVPASVLLLAVDVSAAALRGGHLELISQQ
LRSLLTSLNREEGAFQSDVRVGLMTYDSRIHLYDLSPALSRPHMLVVTETEDLQLPVREG
LLVPLKDCIDSINSVLQRIPLFSAEFEEAGGVLLELPVKAGLVVLQELGCPGKLLVFQTA
PFIEGTHTHNSSSFFSSNKPKSLFQPPDPAVSLAKECVSQGCGVHLFVFSQQDVGGAWPG
HVPYLTGGELHCYHSLQGELDRERFSSDLRRTVETETGYRATLRVHVSKDLRVSGCYGSF
VPGPNPAHVTMATLDWRTTLAVELTHSRALDEKRGVVVQTVLSYTSQQGERRTRVHSLSL
CCSHHLLDTFCNCQAQTLLTFYCKKMYCAVLERPLQELREELQTEVTESLACYRKHCSSS
SVSPGQLVLPQHLKTLPVYLNSLRKSEVLLPGLRSSVHQRLQLRCQVVSMDTKTTAGHFY
PLLLPLPVGGDTSSPLSLGEAVRCTAASLDHGGLYLVHGPLVLLLWVGHNVSNTSLVQLF
NITCLSTLPSGETKLPVLDNPLSVSVRSLINALNSQTHYTRKLRVVKQGDSCEEALQRLL
VEDKSPNGGASYADFLYHLHVNSIQLLVR
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggacattccagctgccaatcagagctacggacatggcgggcagcccggggtgtgtcat
aatgcctggtcagcaaccacacccccgaccggtcttggatgtaccactgcccaaggactc
tccagtgaccctctacccagcttacagggtctgaacctgggcccagcctcacaccagagt
ccctctaataacatccctcaatccatggctcagttacagtactcacaccagggctgtctc
agcagtcttcctacgaccccatttaggaaccaatcaccttcagctcttataccatgcctg
aatcaagagcctcacataccacatgtacacatgggtaattatatttcctacaacattcct
ccaccatcaacactcgtccctctgaaacaaggtccgccagctagtgggcctccatccacg
ataccgtcttcaaaccagggtccccagaatactgtctctcctccagtctcttcctcttct
ccatatcctccatatccgtcttcaaaccagggtccccagaatactgtctctcctccagtc
tcttcctctcctccatatcctccatatccgtcttcaaaccagggtccccagaatactgtc
tctcctccagtctcttcctcccctctatatcctccatatccgtatgcaaaccaaggcttt
gtgaatggccctcctgtgacattgacaagtccaaaccaaggctttgtgaatggccctcct
gtgacattgacaagtccaaaccaaggctttgtgaatggccctcctgtgacattgacaagt
ccaaaccaaggctttgtgaatggccctcctgtgacattgacaagtccaaaccaaggcttt
gtgaatggccctcctgtgacattgacaagtccaaaccaaggctttgtgaatggccctcct
gtgacattgacaagtccaaaccaaggctttgtgaatggccctcctgtgacattgacaagt
ccaaaccaaggctttatgaatggccctcctgtgacattgacaagtccaaaccaaggcttt
atgaatggccctcctgtgacattgacaagtcccaaccaaggctttatgaatggccctcct
gtgacattgacaagtccaaaccaaggctttgtgaatggccctcctgtgacattgacaagt
ccaaaccaaggctttgtgaatggccctcctgtgacattgacaagtcccaaccaaggcttt
atgaatggccctcctgtgacattgacaagtccaaaccaaggctttatgaatggccctcct
gtgacattgacaagtccaaaccaaggctttatgaatggccctcctgtgacattgacaagt
cccaaccaaggctttgtgaatggccctcctgtgacattgacaagtcccaaccaaggcttt
atgaatggccctcctgtgacattgacaagtcccaaccaaggctttatgaatggccctcct
gtgacattgacaagtcccaaccaaggaccccccaacagccgtttttcatccatgtcacca
tgtgggagccagagccaacagtgttcacacccgtatcctccacaactcacctcaccagtc
cagcagcaaccccaatgggtcctggctcagcaacactatagtcacagtggtgtaatgtac
aagcctggtgccacctcacatcctgtacaggaggataccaccatgcaaccgtcctgtccg
tctctgggggacagtggggtgtccggccccagctcacctatctcagagtcacgctatggc
ctacaccctcagcttctacccagcgctgtgcgtatgatggaggaggacaggacagtgtgg
gaggggaaggtgtttgtgtctgaacccatctcctctctacctccgttggctaccacagac
tgtgtcatggaggacagaggtaactgcagtcctcggttcatcctttctacctcctactgc
gttccgtgtgagggccagacggccctccagagccacctacccctgggggccctagtcagc
cctctggctaagctacacacaggagagcgccccctgtctgtgtgtatggaggcagacact
gtaaagggctgtggggagtgtggggcttacatgtgttcagctatgggatggcaggactgt
ggacagagattctactgcccattctgtgggaaactccgtgaagttggatggcagcattac
cagccaacacagggagtagaggggaacagagtggacagagagcagagacctgagctcagt
ctgggctcctatgagatactggacagtcaacaggatgtgcctgcttctgtgttgctcctg
gccgtggatgtgtctgctgcagcactgagaggaggacacctggagctcatcagtcagcag
ctacgttctctactcacatcactaaatagggaggaaggtgcgttccaatcagatgtccgt
gtggggttgatgacctatgacagccggatccacctctatgacctcagccctgccctgtcc
cgcccacacatgctggtcgtcacggagacagaggacctgcagcttcctgtgagggagggg
cttctagttccactcaaagactgcatagacagtatcaacagtgtcctgcagcgtatccct
ctgttcagtgcagagtttgaggaggcaggtggagttctcctggagctgcctgtcaaggct
ggactggtcgttctacaggagttgggttgtcctggcaagctgctggtcttccaaactgct
cccttcatcgaggggacacacacacacaactcctctagcttcttcagctccaacaaacca
aagtctctgtttcagcctccggaccctgctgtctcattggctaaggagtgtgtcagtcag
ggctgtggcgtgcacctgtttgtgttctcccagcaggatgtgggcggggcttggccggga
catgttccttacctgacaggtggagagctgcactgctaccacagtctccagggagagttg
gacagggagcgtttcagcagtgacctgaggaggactgtagagacagagacgggctatagg
gccacactcagggtacatgtcagtaaagatctgcgcgtgtcagggtgttatggctcgttc
gtccccgggcccaaccccgcccacgtcaccatggcaacccttgattggcgtacgacgctg
gccgttgagttaacacacagcagagctctggacgaaaagaggggcgtggtcgtacagacc
gtcctgtcctacaccagccaacagggagagaggaggacccgggtccacagtctgtctctg
tgctgctcacaccacctactggacaccttctgtaactgccaggcccagactctgctcacc
ttctactgcaagaagatgtactgtgccgtgttggagcgccctctacaggagctgagagag
gaactgcagacagaggtgacagagtccttggcctgctataggaaacactgcagctcctcc
tctgtgtccccgggacagctggtcctaccccagcacctgaagaccctgccagtctacctc
aacagcctgaggaagagtgaagttctgcttcccggcctccgcagttcagtacaccaacgc
ctgcagctccgctgtcaagtggtctccatggataccaagaccacagcaggacacttctac
cctctgctgctaccactgccagtaggtggcgatacctccagtcctctcagcctaggggag
gctgttcgctgcactgctgctagcctggaccatggaggtctctacctggtccacggaccc
ctggttctgctactctgggtgggccacaacgtctcgaacacctccctggtccaactcttc
aacatcacctgtctgtccacactaccctctggagagacgaagctgcctgtgctggacaac
cctctgtctgttagtgtgaggtcactcatcaacgccctgaactcacagacacactatact
cgcaagctgcgtgtggtgaagcagggggacagctgtgaggaggctttacaacgcctcctg
gtagaagataagagtcccaacgggggagcgagctacgctgacttcctgtaccacctccac
gtcaactctatacaactgctggttcgttag
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