KEGG   Oncorhynchus keta (chum salmon): 118386354
Entry
118386354         CDS       T09424                                 
Name
(RefSeq) integrin beta-5-like isoform X1
  KO
K06588  integrin beta 5
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04148  Efferocytosis
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
oke04810  Regulation of actin cytoskeleton
oke04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118386354
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118386354
   04148 Efferocytosis
    118386354
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118386354
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118386354
   04810 Regulation of actin cytoskeleton
    118386354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118386354
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118386354
Membrane trafficking [BR:oke04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118386354
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin beta subunits
   118386354
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 118386354
NCBI-ProteinID: XP_035629936
LinkDB
Position
7:complement(38284103..38381838)
AA seq 801 aa
MWNPWQLLYRTALGCMILEIFIHNVAQGLNVCMSGSAMSCEECLIIHPSCAWCAQEKFGS
ARTLMSRCDLRQNLQKRGCEAHHMESPSSSTTVMKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTARKYQDNPCNGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTNMDYPSLALLGEKLAANNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFDVSIDARGCPAPGTQQSFTIKPVGFKDRLEVSVDYRCACGCTNQTQANSTH
CSSIGQYTCGICRCDPGYLGARCECQEGEAGSMYLSACRQAEGMQICGGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGQICSGRGSCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSSGRLSDN
QTCQRLCKDEIITVETLKTDDPNAVLCLYKTENECVMKFTYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMASNPLYK
HPISNDYVETDFSKSYNGAAH
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtggaacccgtggcagttgttgtaccgtacagctcttggctgcatgattctggaaata
tttattcacaatgttgcacaaggtctgaatgtgtgtatgagtggcagcgctatgtcttgt
gaagaatgcctcatcatccatccaagctgtgcctggtgtgcgcaagagaagtttggcagt
gcgaggaccctgatgtcacggtgtgacctgcgtcagaacctgcagaagaggggctgtgaa
gcccatcatatggagagtcccagtagcagcaccacggtaatgaagagcgaacccctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctcagtctccgaccaggtgaccagacatcattcaaagtgcaggtgcgtcaagtggaggac
tacccagtggacctgtactacctgatggacctgtctctgtccatgaaggatgacctggac
accatcaggaacctgggcaccaaactggccgatgagatgaggaaactcaccagcaacttc
agactgggcttcggatcctttgtcgacaagaacatgtcccccttctcctacacggcccgc
aagtaccaggacaacccctgcaatggatacaaactgttccccagctgtgtcccctccttc
gggttccgccacctcctctccttgactgacaaagtggatcgcttcaacgaggaagtacag
aaacagatggtgtctcgcaacagggacgctccggagggaggcttcgatgccatcctgcag
gctgccgtctgtaaggagaggataggctggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaagctgggagggctggtccagccc
catgatggggagtgccacatgaatgagaagaatgagtacagtggctccaccaacatggac
tacccctctctggctctactgggagagaagctggctgcaaacaacatctatctcatcttc
gctgtgacaaaaaggctgtatgtcatttacaagaatttcacagcactgatacctggaacc
acagtggagattctggatcaggactccaagaacatcatacaacttatagttaacgcctac
aataacatccggtccaaggtggagctgaccgtgtgggatcaacctgaagacctcagtctg
tccttcactgccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgac
ctcaagattggagacacggtgtccttcgacgtgagtatagacgctagaggctgccccgcc
ccaggtacccagcagagtttcaccatcaagcctgtgggcttcaaggatcgtctggaggtg
tctgtggactaccgctgtgcctgtggctgcaccaaccagacccaggctaacagtacccac
tgcagctccattggacagtacacctgtggtatctgccgctgtgacccgggctacctgggt
gcacgctgtgagtgccaggagggtgaggctggcagcatgtacctgagcgcctgcaggcag
gctgaggggatgcagatatgtggtgggagaggggagtgcagttgtaaccagtgcctctgc
tatgagtcagagttcgggaagatctacgggaccttctgcgagtgtgacgacttctcctgc
gctcgacacaagggcatcctctgctcgggtcacggagagtgccactgtggagagtgtaag
tgccatgcgggctatatcggggacaactgtaactgttccactgacacctcatcctgtgtg
tctgatgacgggcagatctgcagcgggcggggcagctgtgcctgtgggcgctgccagtgc
actgaaccaggggccttcggggacacctgcgaaaaatgccccacctgtcctgatgcctgt
ggcaccaagagggaatgcatcgaatgccggcttttcagctctggaagactgtctgacaac
cagacctgccagcggctatgcaaggatgagatcatcactgtggaaacgcttaaaacagac
gaccccaacgctgtcctctgcctgtacaagacggagaacgaatgtgtgatgaagttcacg
tactctgaacacgccaacggcatgtcagtcctcacagctctcaaagagccagagtgtggt
gcagcgccggacgccatgacggtcctcctggcggtggtgggcagtatcctactggtgggc
atcgtgctgctagccatctggaagctggtcatcaccgtgcacgaccgcagagagttcgcc
cgcttccaaagcgcacgctcccgcgcacgatatgagatggcctccaaccccctgtacaag
catcccatctccaacgactatgtagaaaccgatttcagcaagtcttacaacggagcagcc
cactga

DBGET integrated database retrieval system