Oncorhynchus keta (chum salmon): 118386354
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Entry
118386354 CDS
T09424
Name
(RefSeq) integrin beta-5-like isoform X1
KO
K06588
integrin beta 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04148
Efferocytosis
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118386354
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118386354
04148 Efferocytosis
118386354
09144 Cellular community - eukaryotes
04510 Focal adhesion
118386354
09142 Cell motility
04820 Cytoskeleton in muscle cells
118386354
04810 Regulation of actin cytoskeleton
118386354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118386354
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118386354
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118386354
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin beta subunits
118386354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118386354
NCBI-ProteinID:
XP_035629936
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Position
7:complement(38284103..38381838)
Genome browser
AA seq
801 aa
AA seq
DB search
MWNPWQLLYRTALGCMILEIFIHNVAQGLNVCMSGSAMSCEECLIIHPSCAWCAQEKFGS
ARTLMSRCDLRQNLQKRGCEAHHMESPSSSTTVMKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTARKYQDNPCNGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTNMDYPSLALLGEKLAANNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFDVSIDARGCPAPGTQQSFTIKPVGFKDRLEVSVDYRCACGCTNQTQANSTH
CSSIGQYTCGICRCDPGYLGARCECQEGEAGSMYLSACRQAEGMQICGGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGQICSGRGSCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSSGRLSDN
QTCQRLCKDEIITVETLKTDDPNAVLCLYKTENECVMKFTYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMASNPLYK
HPISNDYVETDFSKSYNGAAH
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacccgtggcagttgttgtaccgtacagctcttggctgcatgattctggaaata
tttattcacaatgttgcacaaggtctgaatgtgtgtatgagtggcagcgctatgtcttgt
gaagaatgcctcatcatccatccaagctgtgcctggtgtgcgcaagagaagtttggcagt
gcgaggaccctgatgtcacggtgtgacctgcgtcagaacctgcagaagaggggctgtgaa
gcccatcatatggagagtcccagtagcagcaccacggtaatgaagagcgaacccctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctcagtctccgaccaggtgaccagacatcattcaaagtgcaggtgcgtcaagtggaggac
tacccagtggacctgtactacctgatggacctgtctctgtccatgaaggatgacctggac
accatcaggaacctgggcaccaaactggccgatgagatgaggaaactcaccagcaacttc
agactgggcttcggatcctttgtcgacaagaacatgtcccccttctcctacacggcccgc
aagtaccaggacaacccctgcaatggatacaaactgttccccagctgtgtcccctccttc
gggttccgccacctcctctccttgactgacaaagtggatcgcttcaacgaggaagtacag
aaacagatggtgtctcgcaacagggacgctccggagggaggcttcgatgccatcctgcag
gctgccgtctgtaaggagaggataggctggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaagctgggagggctggtccagccc
catgatggggagtgccacatgaatgagaagaatgagtacagtggctccaccaacatggac
tacccctctctggctctactgggagagaagctggctgcaaacaacatctatctcatcttc
gctgtgacaaaaaggctgtatgtcatttacaagaatttcacagcactgatacctggaacc
acagtggagattctggatcaggactccaagaacatcatacaacttatagttaacgcctac
aataacatccggtccaaggtggagctgaccgtgtgggatcaacctgaagacctcagtctg
tccttcactgccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgac
ctcaagattggagacacggtgtccttcgacgtgagtatagacgctagaggctgccccgcc
ccaggtacccagcagagtttcaccatcaagcctgtgggcttcaaggatcgtctggaggtg
tctgtggactaccgctgtgcctgtggctgcaccaaccagacccaggctaacagtacccac
tgcagctccattggacagtacacctgtggtatctgccgctgtgacccgggctacctgggt
gcacgctgtgagtgccaggagggtgaggctggcagcatgtacctgagcgcctgcaggcag
gctgaggggatgcagatatgtggtgggagaggggagtgcagttgtaaccagtgcctctgc
tatgagtcagagttcgggaagatctacgggaccttctgcgagtgtgacgacttctcctgc
gctcgacacaagggcatcctctgctcgggtcacggagagtgccactgtggagagtgtaag
tgccatgcgggctatatcggggacaactgtaactgttccactgacacctcatcctgtgtg
tctgatgacgggcagatctgcagcgggcggggcagctgtgcctgtgggcgctgccagtgc
actgaaccaggggccttcggggacacctgcgaaaaatgccccacctgtcctgatgcctgt
ggcaccaagagggaatgcatcgaatgccggcttttcagctctggaagactgtctgacaac
cagacctgccagcggctatgcaaggatgagatcatcactgtggaaacgcttaaaacagac
gaccccaacgctgtcctctgcctgtacaagacggagaacgaatgtgtgatgaagttcacg
tactctgaacacgccaacggcatgtcagtcctcacagctctcaaagagccagagtgtggt
gcagcgccggacgccatgacggtcctcctggcggtggtgggcagtatcctactggtgggc
atcgtgctgctagccatctggaagctggtcatcaccgtgcacgaccgcagagagttcgcc
cgcttccaaagcgcacgctcccgcgcacgatatgagatggcctccaaccccctgtacaag
catcccatctccaacgactatgtagaaaccgatttcagcaagtcttacaacggagcagcc
cactga
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integrated database retrieval system