Oncorhynchus keta (chum salmon): 118386679
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Entry
118386679 CDS
T09424
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118386679 (taf1b)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118386679 (taf1b)
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
118386679
NCBI-ProteinID:
XP_035630301
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All DBs
Position
8:2623125..2638240
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AA seq
600 aa
AA seq
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MDEEQTGGYSDICGQCGEVNWGVSDEGRFYCRSCHNVIERTKEVVDTNTFMVGTSRVSSI
SKGTRRKKLEQGREWMVCEGFQFILKHQAEALLAMGVCPQFKDDVLCQFWRMYLQKSRQA
YTKNPVHDGKFRLRSQASGESDSAPESSVMSDSMMSASETDGDGDWASGGGSVSGHTSDG
ASSVCSGSIDAVSYLTTRQRRSQGLMSMPKTLALCHLALLWAREAITLADLLRFVNEGHI
PYVNAYEDFPEEMKLYGRDSLIFRVESIPSYSHLHKEAQTLAVFLELPLFPPITLDCLMH
PSLLTLRYLTEANLPDELHDWVCRIMEKAGMESSVTFEPMRSRSPLPHYDVQAAALIIVA
MKLLFKLDDHTEWDLSNDASDKNKENPDGNSFNLRWWYRAMQTALTTAARRQQDNIARKH
WKPQKPLYTSKKDKSVVLKRRRIAEQLQLSFQKLSGSPVAPPSTPPSSFCFRWGEEGEEV
WDGPSHHHLTLDSSVRQRGASLQPANPEYWHPALRACKPRFCKSHYAEIEVTLPRMYVWL
LDLFSFLLGVKPGCVYEEVLKVERRFLRSSKSQPRARATPRKTQPQKLHKRKQTSKTCSR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacaaacggggggctacagcgatatctgtggccagtgtggagaggtgaac
tggggggtgtcggatgagggtcggttctactgcaggtcctgtcataatgtcatcgagaga
acaaaagaagtggtggacaccaacacttttatggttggtaccagcagagtgtcctccatc
tccaagggaaccagaaggaaaaaactagagcaagggcgagagtggatggtgtgtgagggc
tttcagttcatcctaaagcaccaggctgaggctcttctggccatgggagtctgcccacag
ttcaaggatgacgtgctgtgtcagttttggagaatgtacctacagaagagccgacaggcc
tacaccaagaatcctgtgcatgatgggaaatttagactgcgttctcaggcctctggggag
tcagacagtgctccggagtcgtcagtgatgagtgactctatgatgtctgcctctgagaca
gacggggatggagattgggcaagtggaggaggctctgtctcaggtcacaccagtgacgga
gcctcctcggtgtgttccggttctattgatgccgtctcgtacctgaccacgcgccagagg
aggagccaggggttgatgagcatgcccaagaccctggcactgtgccacctggccctgctg
tgggccagagaggccatcacactggcagacctgctcaggtttgtgaatgagggccacatc
ccctatgtgaacgcctacgaggacttcccagaggagatgaagctctacggccgagactca
ctcatcttcagagtggagtctatcccctcttacagccacctgcacaaggaggcccagacc
ctggctgtgttcctggagcttcccctgttcccccccatcaccctggactgcctgatgcac
ccctccctgctcactctccgctacctcaccgaagccaacctgcccgatgagctgcatgac
tgggtgtgcaggatcatggagaaggctggtatggagtcgtccgtgacctttgaacccatg
aggtccagatcccctctcccacactacgatgtccaggctgctgccctgatcatcgtcgcc
atgaagctgctcttcaaactagacgaccacactgagtgggatttatccaatgatgcaagt
gacaagaacaaggagaacccagatgggaacagctttaacctgaggtggtggtacagggca
atgcagactgccctgaccacagctgcacggagacagcaggacaatatagccagaaagcat
tggaagccccagaaacctctatatacctcgaagaaagacaagtcggtcgttctcaaaagg
agacgtattgcagagcagctccagttgagtttccagaaactgtctggttcccctgtggcc
ccaccatccacccctccctccagcttctgtttccgctggggtgaggagggggaggaggtc
tgggacgggcccagccatcaccacctaaccctggacagcagcgtccggcagagaggggca
agcctccagcccgccaacccagaatactggcacccagccctgagggcctgcaagcccagg
ttttgtaagagccactatgcggagatagaggtcactctccccaggatgtacgtgtggctg
ttggacctcttctccttcctcctgggggttaaacctggctgtgtatacgaagaggtactg
aaggtggagaggcgcttcctcaggagcagcaagtcccagcccagggcaagagctacaccc
agaaagacacagccccaaaaactacacaaacgcaaacaaaccagtaaaacatgttctcgg
tga
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