Oncorhynchus keta (chum salmon): 118386820
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Entry
118386820 CDS
T09424
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118386820
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118386820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
118386820
NCBI-ProteinID:
XP_035630583
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Position
8:complement(13820861..13839000)
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AA seq
617 aa
AA seq
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MDQQHGKVERFLKLGYSHSDIARVLESLRHDAQTNDILEELIKTCQTPTTTTPSIPASRS
AYSSPQLIPRGCSSPQPSQRLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTADQHILHELEKRAILVYTPSRCVNGK
RVVCYDDRYIVKLAYESDGIVVSNDNYRDLQIERPEWKTFIEERLLMYSFANDKFMPPDD
PLGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRA
KSKPTAQTDRERSFLPSGPSPALIQEVSQEAHPYTSPYELDLTTTHLYRYLSTPPPLIKE
EHSHSHSHRASPIDQFTSQRKTGSPTLHHRSSLSLCPSPDTDEAFSSLEASLSRLYVQDQ
TNNTKGPVVSYTYSSGVANCSQHSGDFYPSSTSSSHSHSHASNQQRLSLGGPSSAWDAPQ
KLPQCGCDDSQSFECSPCMYKHQHLQSKLGGCSYAVHSNHIHFTEQQYFQSPPPQRQSHS
LPEHSPGQGLSGERVGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNM
SELVPLIQRFRISHIPF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgcgcgcgtgttggagagcctgcgccatgacgcccagacaaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccccatccataccagccagccgctca
gcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagccagcgc
ctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttcgtgccc
ctgtggaggaaggagcagcccagtcccgaggcccccatgacagcagatcagcacatcctc
catgagctggagaagagggcgatcctggtgtacaccccgtcacgctgcgtcaacgggaag
agagtggtatgttacgacgaccgctacatcgtcaagctggcctacgagtccgacggtatc
gttgtgtccaatgacaactacagagacctgcagatagagaggccagagtggaagacgttc
atagaggaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctccagatgat
cctctgggaaggaatggcccaacgattgacaactttctgatgaaaaagcagtggacccca
gaaaacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgcaag
ttctaccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgagagcc
aagagcaaacctactgctcaaacagacagggagcggtcatttctcccctcaggccccagc
cctgctctgatccaggaagtcagccaggaggcccacccttacacatccccttatgagctg
gatctaactactactcatctatacagatatctatccacaccgcctccccttataaaagaa
gagcattcccattcccattcccacagggcttcgcctatcgatcagttcaccagccagaga
aaaacaggcagcccaactctacaccacaggtccagcctcagcctctgccccagcccagac
actgacgaggccttcagctccctggaagcctccctgtccagactctatgtccaggaccag
accaacaacaccaaggggccagtggtgtcctacacctacagcagtggggtggccaactgc
agccagcacagtggggacttctacccttccagcacttccagcagccacagccacagccac
gccagcaaccaacagaggctcagcctgggtggaccctcctcagcctgggatgccccgcaa
aaactgccacagtgtggctgtgacgactcacaaagctttgagtgcagcccgtgcatgtac
aaacaccaacatctccagtcaaagctaggagggtgctcctatgctgttcacagtaaccat
atccatttcacagagcagcagtacttccagagtcctcccccacaaaggcagagtcacagc
ctcccagaacacagcccgggacagggcctctctggcgagagagtggggatgaccaggtcc
aatggaggtaaagctccagagagtgagcagaggaggagtgtgaagaaccagctcagcacc
ctcttcccccacagcatggtagactatgtgatgagtgtgtacccacacaccctcaatatg
tcagagctggtgcctctgattcagaggttccgaatcagccacattcctttctaa
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