Oncorhynchus keta (chum salmon): 118386959
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Entry
118386959 CDS
T09424
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118386959
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Other domain-containing proteins
Patched domain-containing proteins
118386959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
118386959
NCBI-ProteinID:
XP_035630895
LinkDB
All DBs
Position
8:19926623..19958793
Genome browser
AA seq
920 aa
AA seq
DB search
MCFIGRNGASASWIWRRMLRQMIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEILVAPTHSFAKVERSLANSLFPIDQSKNKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLSVNYKGFNYTFAHLCVLSHQDKRCILDDIITIFEDIRLA
ILSNYTFSKVPVSYPNTTLKDGRVSFIGHQLGGVAFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDVIAEKWENAFCTLISRLSTLSEDLHIQSLTSFSLWRDFHQTGVLAKGEVLVSMV
LLLLAATISSSMRDCLRGKPFLGLLGVLTIAIANVTAAGIFFISDGKFNSTLLGIPFFSM
GHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIE
SVKIFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWF
KTMMSDGHDHVTHHEVLPYHNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGC
LQISDGSNIVNLLASNTPSVSYATTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLTTLS
HGFNKISWMDNYFQYLKVVNVSASTKSDFITILQGSFLRSPEYQHFMEDIILSKTDGDEM
EIIASRMYLVARTTEKTREEVVELLERLRPLSLINNIKFIVFNPTFVFMDRYSSSVVSPI
LTSAFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVHMDSISILCLIYT
LNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNACCFIIGMLPLVFVPSNLT
YTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREMMERERVR
EREEIECIEVRENPDHVTNV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaacggggcatctgcaagctggatctggaggaggatgctgcgg
caaatgatacacagagggctcaaagcttctttctactggctgggcttatttgttagtagg
catccggtttttttcctcaccgttcccgcagtcttaaccatcattttcggatctacagtc
ctgagcagattcaagcccgaaacggacctcgagatactggttgccccgacccacagcttt
gctaaagtagagaggagtcttgcgaacagccttttccccatcgaccagtctaaaaacaag
ctgtattccgacctgcacacccccggcagatatggcagactgattctactggccaagtct
gggggaaatatattggagctagccgaccaggtcctgcaggttcacaagcaggtgttggat
ttgagtgttaattacaagggattcaattacactttcgctcatctctgtgtcctgagccat
caggataagcgatgcatcttggatgatataattacgatattcgaagatatccgtttagct
attctgtcgaattatactttctcgaaggtgcccgtgagctatccaaatacaaccttaaag
gacggccgtgtctctttcatcggccaccagctgggtggagtggccttctcgcccaacagc
cgagaccagcaggtgaagtttgcccgtgccgtccagatcacctactacctccgcaatcat
ggccccgtggttcaggacgtcatcgcagagaagtgggagaacgccttctgcaccctcatc
tcacgcctgtccacgcttagcgaggacctgcacatccagtctctcacctccttcagcctg
tggagggacttccaccagacgggagtgctggctaaaggggaggtgttggtcagcatggtg
ctcctcctgctggcagccaccatctccagctccatgagggactgcctgagagggaagccc
ttcctgggtctactgggtgtgctcacaatagccatcgccaacgtgactgcagctggcatc
ttcttcatctccgacgggaagtttaactccacgctgctggggatccccttcttttccatg
ggtcatggaaccaaaggagtgtttgagctcctggcgggctggagaagaactcgagagagc
cttcccttcaaggagcgcgtggcagacgccttcgccgacgtgatggtgtgctataccatg
accagttccctctacatcatcacctttggcatgggtgccagccccttcaccaacatcgag
tcggtgaagatcttctgccagagcatgtgcgtggccgtcctggtcaactacttctacgtg
ttctccttctacggttcctgcttggtgttcgctggtcagctggagcagaaccgctaccac
agtgtgttctgctgtaagatcccctcagtggagtacctggaccgccagcccacctggttc
aagaccatgatgagtgacggccatgaccacgtcactcaccacgaggtcttgccctaccac
aaccacttcatccagcacttcctgagggagcactacacggagtggatcaccaacacctac
gtcaagcccttcgtggtcatcctctacctgatctacgcctccttctccttcatgggatgt
ttacaaatcagtgatggatccaacatcgtcaacctcctagccagcaacacgcccagtgtg
tcctacgccacgacccagcagaagtacttcagtaactacagccccgtgatcggcttctac
atctatgagcccatcgagtactggaactccacggtgcaggagcacctcacaacgctgagc
cacggcttcaacaagatctcttggatggataactactttcagtatctgaaggtggtgaat
gtgagcgcctcgaccaaaagtgatttcatcaccatcctgcagggctccttcctgcgcagc
ccggagtatcagcacttcatggaggacatcattttgtccaagacagatggagatgaaatg
gagatcatcgcgtccaggatgtacctggtggcacggaccacggaaaagacacgggaggag
gtggtggagctgctggagaggctccgcccactatcgctcatcaacaacatcaagttcatt
gtcttcaaccccaccttcgtcttcatggaccgttacagctcctccgtagtgtcgcccatc
ctcacatcggctttcagtgtgctcaccattctcatcctcaccttcttcctggtcatcaac
cctctggggaacttctggttgatcctgaccgtcacctccgtagagctgggggtcctgggc
ctcatgaccctctggaatgtacacatggacagcatctctatcctgtgccttatttatact
ctcaactttgccatggatcactgtgcaccccacctgtataccttcgtactggccacggag
cacaccaggacccagtgcattaagatctcgctggaggagcacggggcggccattttgcaa
aatgcctgctgtttcatcattgggatgttgcccttggtgtttgtgccttccaacctgacc
tacacactgttcaagtgctccctcctcaccgcaggctgcacagtgctgcactgtttcgtt
atcctgcctgtgtttctaacgtttttccccccgtccaaaaaaaggcacaagaagaagaaa
cgggccaaacggaaagagagagagagggagcgggagatgatggagagggagagagtgagg
gaaagggaggagatagagtgcattgaagtcagggagaaccctgatcatgtgactaacgtc
tga
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