Oncorhynchus keta (chum salmon): 118387013
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Entry
118387013 CDS
T09424
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387013 (ccdc50a)
Membrane trafficking [BR:
oke04131
]
Autophagy
Other autophagy associated proteins
Others
118387013 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
118387013
NCBI-ProteinID:
XP_035630993
LinkDB
All DBs
Position
1:50885819..50918839
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AA seq
653 aa
AA seq
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MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGATRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPEYVSFEPSRTRYDSVEPSTSGRSRSPEHHLESRGGSSRVKHGDPYPEDHLSNSRGKRG
DSYPDYHHPTEGRSKGKGDQRGRDPQGSQSTFYPDSREPRRHREERGDEGERVVRRKERP
SRPPPQSHNPVERDEAWERKRECEKDRQREPRRDEERERDAPRHEERSRGGQRHGLRSQD
QEHGRDKHREKDRRRERTKSRERGLDEDYYEPIPSSRAWTVGGVEGPGDEWGPMARLHSG
PSELCEEEEARRSPCPGVMRGERRGHRDPGEGPSMGTERSYTHPAPREPGRIVQGGPGGR
GAVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQDEEI
ARLLMEQEKKEYKKSREKEKQGMRPEERGMRLEERRRPEGGDFKPNSEEVVRPRSREEEY
QRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTYYRQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccattgctcgtaagctgcaggagaag
gagatgaaagaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccacccgagcccctctggacctggatgacaaacccaggcgacct
ggttcaaactcccactcccccgagtcgcatccccttaccccaggctcacgacgcgacctc
tcccccgagtatgtttcttttgagcctagcaggaccagatacgactctgtggagcctagc
accagtggacgttccaggtcccccgagcaccatttagagagtagaggagggagtagtagg
gtcaagcatggagacccatacccagaggaccacctctccaatagcagggggaaacgtggg
gacagttacccagactaccaccaccccaccgagggtagaagtaaagggaagggggaccag
aggggccgagacccccaggggtcccagtccaccttctacccagacagccgtgagcccagg
agacacagagaggagagaggggatgagggagagcgggtggtgaggaggaaggagaggccc
agccggccgcccccgcagtcccacaaccctgtggagagagacgaggcttgggagagaaaa
agagagtgtgagaaagaccggcaaagagaacccaggagagacgaggagagggagagagac
gcaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcgatcgcaagac
caagagcatggccgagacaaacacagagaaaaagacagacgccgagagagaaccaagagc
agggagcgaggtcttgatgaagactattacgagcccatacccagcagccgggcctggact
gttggtggggtggagggccctggggatgagtgggggcccatggccaggctccactctggc
cccagtgagctgtgtgaggaggaggaggccagaaggagcccctgccctggcgtgatgagg
ggggagaggagaggtcacagggaccctggggaggggcccagcatgggcacggagcgctcc
tacacgcaccccgctcccagggagccaggtcgtatcgtgcaagggggaccagggggtcgc
ggcgcagtggtggtaggaggggagtacgggatgggcgaggccacccagggcatcgcccag
ctggacctgagggagcaggagatcctggacatggaggtggcccggaaactacaggaggaa
gaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcaggatgaggagata
gcccggctgctgatggagcaggagaagaaggagtacaagaagtccagggagaaggagaag
caggggatgaggccggaagagagggggatgaggctggaagagaggaggcggccagaggga
ggagacttcaagcccaactcagaggaggtagtgcgtcccaggtcccgagaggaggagtat
cagaggcacaggaaccaccaaaagcctgccagacctcctcaacctcttccacatgactat
gagaatgtggagaccagctacagctactcagagagccactactcttcccgcactccagcc
agacctgaggctgcttacaaaggtacctattacaggcagtga
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