Oncorhynchus keta (chum salmon): 118387019
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Entry
118387019 CDS
T09424
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03410
Base excision repair
oke04210
Apoptosis
oke04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118387019 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118387019 (parp1)
04217 Necroptosis
118387019 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118387019 (parp1)
03036 Chromosome and associated proteins [BR:
oke03036
]
118387019 (parp1)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118387019 (parp1)
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
118387019 (parp1)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118387019 (parp1)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118387019 (parp1)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
118387019 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118387019
NCBI-ProteinID:
XP_035630997
LinkDB
All DBs
Position
8:22600287..22611963
Genome browser
AA seq
1013 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAQSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTIDPEKPQLGLIDRWYHTACFVGRREELVFKPEYSAAQ
LKGFNTLRVEDKEELKRRLPVVKSKGKRETDEVDGEGASKKKEDEEEKKKVDLQMKEQSQ
LIWGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALKPCEECQGQLV
FKSDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELPFLKKFKFKRQDRVFPKVAPP
PASSASAPVPSASSAPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQAQSAASRSGAMAGKSTKRVKEEEGVSKASKKMKLTVKGGAAVDPDSCLEN
SAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGNKL
DKFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTASAGT
NSLLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVS
DSSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLKGG
AEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFKIVR
EGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDPSAT
VTLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgcaaggaaaacatagcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgacggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccagtctcctgcagacatcgctggattctctgacctgcgatgggaggac
caggagaaggtcaagaaggccatcgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggggagaagactctgaatgactttgcagtggagtatgccaagtcc
aatcgcagcacatgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacgattgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgtgggccgcagggaggagctggtcttcaaaccagagtacagcgccgctcag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggttgccc
gtcgtcaaatctaaaggaaagagagagactgatgaggtagatggagaaggggcatcgaag
aagaaggaggatgaggaggagaagaagaaagtggacttgcagatgaaggagcagagccag
ctgatctggggcatcaaggacaagctcaggcagttctgttccaccaacgacatgaaggag
ctgctcatcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagccta
ggagactgcatggcctttggcgcactgaagccctgcgaggagtgccagggccagctggtg
ttcaagagcgacgcctactactgcactggagacctctccgcctggaccaagtgtgtgttc
aagacccagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttccc
ttcctcaagaagttcaagtttaagagacaggaccgggtgttccccaaggtggcccctccc
ccagcctcttctgcatccgctcccgtccccagtgcctccagtgctcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggatgagctgaaggctgctgtggaggagctgggcgggaagatcacc
ggcacagccaataaggctactctctgcctcagcaccaagaaggaggtagagaagatgagt
aagaagatggaggaggcagaggaggcgggcgtgcgcgtggtctcagaggacttccttact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcacgccatctccccc
tggggggccgaggtcaaactagagacccaggctcagtcagcagcctccaggtctggagcc
atggctggcaagagcaccaagagggtgaaggaggaggaaggtgttagcaaggccagtaag
aagatgaagctgactgtgaaaggaggggcagcagtggacccagactcatgtctagagaac
agtgctcatgtcctggatcagaatggcaagatcttcagcgctacgctaggtctggtggac
atcgtcaggggaaccaactcctactacaaactgcagctgctggaggacgatgtgcataaa
cggtactgggtgttccgctcctggggcagagtgggcaccaccatcgggggaaataagctg
gataagttccatgataagaactctgccatggacaacttcctgggtgtgtacgaagagaag
acaggaaacgcctggggctcttcccacttcaccaagtatcccaacaggttctaccctctg
gagatcgactatggtcaggatgaggaggcggtgaagaggctgacagccagtgctggcaca
aactctctgctggccaagcctgtccaggaactcatcaggaccatctttgatgtggagagc
atgaagaaggccatggtagagtttgagattgacctccagaagatgccgctggggaagctg
agtaagaggcagattcagagtgcctacgccctcctcagtgaggtgcagcaggctgtgtcg
gacagttcctcagagtcccacattctggacctgtccaatcgcttctacaccctcatacct
cacgactttggcatgaagaaaccaccgctgctcagcaaccttgactacattcaggctaag
gtccagatgttggacaacctactggacattgaagtggcctacagtctgctgaaaggaggg
gccgaggataacaagaaggaccctatcgacatcaactatgagaaactcaaaaccaagatt
gaggttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtcaagaacaca
cacgctgctacacacaacacctacacactggaagttgaggagatcttcaagatcgttagg
gagggagagtaccagaagtaccgccccttccaggatctgcccaatcgacagcttctgtgg
cacggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgtatcgcccct
cctgaagcccccgtgacgggctacatgtttggcaaaggtgtgtactttgccgacatggtg
tccaagtcggccaactactgccacacctcccagtccgacccaactggcctacttctactg
ggagaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacatcacaaaacta
cccaagggtaaacacagtgtgaaaggtttgggtcgaaacgccccagatcctagtgccact
gtcactttagatggggtgcaagtgcctctgggaaaaggaaccaacaccaacatcgacgac
acgagtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaacctgaagtac
ctgctgaagatcaagttcaactaccagatgtccatgtggtga
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