KEGG   Oncorhynchus keta (chum salmon): 118387037
Entry
118387037         CDS       T09424                                 
Name
(RefSeq) flap endonuclease GEN homolog 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118387037
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     118387037
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N DUF685
Other DBs
NCBI-GeneID: 118387037
NCBI-ProteinID: XP_035631031
LinkDB
Position
8:23174314..23182203
AA seq 968 aa
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLIGVKLVFVMEGEAPKLKAETMSKRTDMRFGWSDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLSILLGCDYIPKGIPGVGKEQALKLIKTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCDPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATLSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
KPSDHCDVSDLLGKMSLHNSTADNNTQQPSAMAAALTITTSNNSVLVLEGPESKSPKKHL
DPGKDHPRLEVRLGPQIQEVMSPPSFTSSGKIPEAAASSPSVSVVIDALHLSDIDWESQS
FTSSPPPQAAGARTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPSYAECSLRDR
VLMRNTCKSVNMADNDDVTIIHVNSQSAAPPYLIDSNNSGPKPMALIPIKSGNDSKPSEQ
PLVCGKKATLVDKDQSIALLHKPQPAHHISKPISLNATQTGPVTATQTQGAKQHGAGEPK
PPQKYRFVKKAISSSSALPQRSHSEPSDTQPGRDDRHMKLHQETKKSVCARVCSSSEDSD
TENQCRGGGQSRAKVKPKSRHRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSA
SMGEQPMRGSSVSTIGKCQDVHPIRVDDDIVFIPSPVSPVIMSDGDDSVICSKSPLPLAE
RVKLKFLK
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgttttttagagtt
tcctctcttacactgattggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggacagacatgagatttgggtggtccgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtagacggctgcatcaccaacgat
ggggacgcttttctctatggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctgtccatccttctgggctgtgattatattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcataaagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgaccctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgaacagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaaacactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacattgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacatgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagccttcggatcactgtgatgtttctgacctcctgggcaagatgtctttgcacaattcc
actgctgacaacaacacccaacaaccctctgccatggcagcagcactgaccattacaaca
agtaacaactcagtgttggtcctggagggtccagagtcaaagtctccaaaaaagcatctg
gatcctggtaaagaccatccccgcttagaagtacgtcttggacctcagatacaggaagtg
atgtcacctccgtctttcacttcctctgggaagattccagaagcagcggcctcctctcca
tctgtttccgtggtgatagatgctcttcacctgagtgacatcgactgggagtctcagtca
ttcacgtcctccccgcccccgcaggctgctggcgctcgcactgccactgaccccaagtca
ctccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgat
ctcagagcagcagaggccgtaccagggccaagttatgcagagtgttcgctgagggacagg
gtcctaatgagaaacacatgcaagtctgtgaacatggcggacaatgatgacgtcaccatc
atacacgtaaactcccagtcagcagcacccccttatttaattgattctaacaacagtggc
cccaagccaatggcactgatacccattaaaagcggcaatgattccaagccatcagaacag
ccgctggtgtgtggcaagaaagccacacttgttgataaggaccagagcattgcattgctc
cataagcctcaacctgctcatcacatctcaaaacctatctcattgaacgcaacacaaaca
ggcccagtcacagcaacacaaacacaaggggctaaacaacatggtgccggtgaaccaaag
cctccacagaagtacagattcgtaaagaaggccatctcatcttcttccgctctgccacaa
aggagccactctgaacctagcgacacacagcctggtcgggatgacaggcacatgaagtta
catcaagaaaccaagaagagtgtgtgtgccagagtgtgttcatcgagtgaggacagtgac
acagagaaccagtgtcggggaggagggcagagcagggccaaagtcaaacccaaaagcagg
cacaggtgccaatacctcacagactattcactgaaacccacctccaaacccagcacctct
acaaaggcagcctgggacacagtgacagcccagcccctcaggcctagagctgtgtctgcc
agtatgggtgaacaaccaatgcgaggcagctctgtgtctaccatagggaagtgtcaggat
gttcatccaattagagttgatgatgacattgtgttcattccaagccccgtttccccagtg
attatgtctgatggtgatgactcagtgatttgcagcaagagcccactgccattggcagag
agggtgaagctgaagttcctgaaatga

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