Oncorhynchus keta (chum salmon): 118387037
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Entry
118387037 CDS
T09424
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118387037
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118387037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
DUF685
Motif
Other DBs
NCBI-GeneID:
118387037
NCBI-ProteinID:
XP_035631031
LinkDB
All DBs
Position
8:23174314..23182203
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AA seq
968 aa
AA seq
DB search
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLIGVKLVFVMEGEAPKLKAETMSKRTDMRFGWSDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLSILLGCDYIPKGIPGVGKEQALKLIKTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCDPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATLSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
KPSDHCDVSDLLGKMSLHNSTADNNTQQPSAMAAALTITTSNNSVLVLEGPESKSPKKHL
DPGKDHPRLEVRLGPQIQEVMSPPSFTSSGKIPEAAASSPSVSVVIDALHLSDIDWESQS
FTSSPPPQAAGARTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPSYAECSLRDR
VLMRNTCKSVNMADNDDVTIIHVNSQSAAPPYLIDSNNSGPKPMALIPIKSGNDSKPSEQ
PLVCGKKATLVDKDQSIALLHKPQPAHHISKPISLNATQTGPVTATQTQGAKQHGAGEPK
PPQKYRFVKKAISSSSALPQRSHSEPSDTQPGRDDRHMKLHQETKKSVCARVCSSSEDSD
TENQCRGGGQSRAKVKPKSRHRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSA
SMGEQPMRGSSVSTIGKCQDVHPIRVDDDIVFIPSPVSPVIMSDGDDSVICSKSPLPLAE
RVKLKFLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgttttttagagtt
tcctctcttacactgattggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggacagacatgagatttgggtggtccgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtagacggctgcatcaccaacgat
ggggacgcttttctctatggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctgtccatccttctgggctgtgattatattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcataaagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgaccctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgaacagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaaacactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacattgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacatgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagccttcggatcactgtgatgtttctgacctcctgggcaagatgtctttgcacaattcc
actgctgacaacaacacccaacaaccctctgccatggcagcagcactgaccattacaaca
agtaacaactcagtgttggtcctggagggtccagagtcaaagtctccaaaaaagcatctg
gatcctggtaaagaccatccccgcttagaagtacgtcttggacctcagatacaggaagtg
atgtcacctccgtctttcacttcctctgggaagattccagaagcagcggcctcctctcca
tctgtttccgtggtgatagatgctcttcacctgagtgacatcgactgggagtctcagtca
ttcacgtcctccccgcccccgcaggctgctggcgctcgcactgccactgaccccaagtca
ctccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgat
ctcagagcagcagaggccgtaccagggccaagttatgcagagtgttcgctgagggacagg
gtcctaatgagaaacacatgcaagtctgtgaacatggcggacaatgatgacgtcaccatc
atacacgtaaactcccagtcagcagcacccccttatttaattgattctaacaacagtggc
cccaagccaatggcactgatacccattaaaagcggcaatgattccaagccatcagaacag
ccgctggtgtgtggcaagaaagccacacttgttgataaggaccagagcattgcattgctc
cataagcctcaacctgctcatcacatctcaaaacctatctcattgaacgcaacacaaaca
ggcccagtcacagcaacacaaacacaaggggctaaacaacatggtgccggtgaaccaaag
cctccacagaagtacagattcgtaaagaaggccatctcatcttcttccgctctgccacaa
aggagccactctgaacctagcgacacacagcctggtcgggatgacaggcacatgaagtta
catcaagaaaccaagaagagtgtgtgtgccagagtgtgttcatcgagtgaggacagtgac
acagagaaccagtgtcggggaggagggcagagcagggccaaagtcaaacccaaaagcagg
cacaggtgccaatacctcacagactattcactgaaacccacctccaaacccagcacctct
acaaaggcagcctgggacacagtgacagcccagcccctcaggcctagagctgtgtctgcc
agtatgggtgaacaaccaatgcgaggcagctctgtgtctaccatagggaagtgtcaggat
gttcatccaattagagttgatgatgacattgtgttcattccaagccccgtttccccagtg
attatgtctgatggtgatgactcagtgatttgcagcaagagcccactgccattggcagag
agggtgaagctgaagttcctgaaatga
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