Oncorhynchus keta (chum salmon): 118387041
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Entry
118387041 CDS
T09424
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118387041 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Other domain-containing proteins
Tubby family proteins
118387041 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
118387041
NCBI-ProteinID:
XP_035631037
LinkDB
All DBs
Position
8:23206582..23261565
Genome browser
AA seq
1829 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKPLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAVL
PPDSSCLPPTRNAVVKFYNACGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPVLYVVR
VEHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRDLVCP
FTNRINIDPRKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVT
SNIWGTKFKIVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSP
NVFSEDEDDLPVTGASGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQ
LDVLSNPTAISSVASAGAGGSSDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGP
PPSHHHQQQQQQQSHPQSHQQPLQQHHQQQQIQHQQQQQLQHHHQQLQQQQQRLAQQHHQ
QQLAQQHQQQIQQQQMLQHQQMQQQQIQQQQQHIQQQIQHMQQQQQHIQQQHQQQLQHQQ
QLQQQLQQQQHTQQLQQQQQQIQQHMQQQQHQQHHQMQQQQQIQQHHQMQQQLQISVPSQ
VSGAAVHQLQQGALQIPVPHPAGGLVAERRVSVEHEHLLKIKPTRSAPQLAEGDTVVFSA
PLELSKMNPPPPYPGTVAAAAASAAAAAANATSGQAGGSNGTPPPVDLCLKKGEFSLYPP
GQQAAQYPTPLGYERITTFDSRGNVEEVCRPRTRLVCNQNIYTLQVPGSSATLRVTSSSS
STDAKKIQLPYASATLNRLTVPRYSIPSGDPPPYPDTANQNTTGGRSTGQRLDSSLIHAT
LRRNSREAALKVSQMLDPQRTLPTKAKSQNAALAASYQQRVPKALYTCSQCSSNSSGLSS
AASSAPSGTANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSASPLVSQSSYNLDGSGNGGG
GGNRDRADYVNSAFTEDEALSQSLRHLALGGADVSGLTVKRPPPYQWDPATTEEVWVPQE
RTGTLSSAGPTGPHKPPPLILSPAQHLDISRLPFILSPKSPTSPSAASFQAAAVAAGYQI
SLQYAPGTTYSGPQQQPMPGSPRLCSPKEVVAPVPFNQQDATLVLPPGYPANLSNLACCP
LPPMYPGGSSCAGLPIPPIALHTPWGTYNPCPPMPSPSGTLPPMPPKLSQMMVDKSVLSP
PPPPPPPPPPPPAELQLQGHGGSPEAMAMEAGEGFQEVLSLNESPVPSSAEKFGKKNRKR
ADGRAEEANAPAIAEGGKSKKEGRALGDFNSLISSPRLGSREKKKPKGQKEQQLKAKKLS
KAPTNSEFQDSSESEPELFISGDELLNQCQSGKKGWKSKRSLRAASELEEIKCRKANEKE
DRGLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDG
NAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggggttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtgctggtgcgatggaacgagccctttcagaaactggccacttgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgacggtacccaggct
ctcatctcttaccgtgatggctttgtcctggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtattgtttggtactgcggacggccaggtgatcgtgatggactgccacgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctggtggaggacagcagcgagagcgacacagactctgacgactacacaccacca
caagtccaacgtttgaagcctctgctgacggtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctcccccactcttatccacactggcctaaaagatgtggta
gtccagtggtgttctcagggggatctcctcgccgtggctgggatggagagagctgtcttg
ccccccgactcctcctgtctacctcccaccagaaacgccgtcgttaagttctacaacgcc
tgcggagaacacatctacacactggacacgcctgcacaacgtcccatcaccacgctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggcccggtactctacgtggtgcgg
gtggagcaccgggtggccagcctgcagctgctgtgccagcagggcattgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttacgtcacc
acagccttcacacccaccatcaagccccccattccagaccccaacaatatgcgtgacttt
gtgagttacccgacggcagggaacgagcggctgcactgcaccatgaagcggacggaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctggggggcttggtg
cccatcctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggttggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccagagacttagtctgtccc
tttaccaacagaatcaatattgaccccagaaagtcccccaaactgtcccgcgctacccag
gagatctcgcggtcgccacggttacccatccggaagccgtccattgggtccccaagtctc
acccgcagagagttccccttagatgacatcacacagcataactaccttgctcaggttaca
tccaacatttggggaacaaagtttaagattgtgggacttgccaccttcttgccaaccaat
cttggtgcagtgatctacaagacaagtctgctccacttgcagcccagacagatgaccatc
tacctgccggaggtgcgtaagatctctatggactacatcaacctacctgtgttcagcccc
aacgtcttcagtgaggatgaggatgacctgccagtcaccggggcctcgggcgtggccgac
gacaaccctccctgcactgtcaacatccccattgcccccatccacagtcccgcccaggcc
atgtcccccacccagagcatcggcctggtccagtccctcctagccaatcagaacgtccag
ctggacgtcctatccaatcccacggccatctcctctgtggcttctgcaggggcagggggg
tcgtctgaccagggccaggacaccatcctgaccgcccagtacacggttcccagcaggtac
tccagtcctggacaggtcatatttggagggctggagatgagccggcttctggttgggcct
cctccctctcatcaccaccaacaacaacaacaacaacaaagccatccacagagccatcaa
caaccactgcagcaacatcatcagcaacaacaaattcagcatcaacaacagcagcagctt
cagcatcaccatcaacagctacaacaacagcaacaacgactggcgcagcaacatcaccaa
cagcaactggcacagcaacatcaacagcagatccagcagcagcagatgctgcaacaccaa
cagatgcagcagcagcagatccagcagcagcagcaacacattcaacagcagatccaacac
atgcagcaacagcagcagcacatccaacaacagcaccaacaacagctccagcatcaacaa
cagctccagcagcagttacagcagcagcaacacacacagcagctgcagcaacagcagcaa
cagatacagcagcatatgcaacaacaacagcatcagcagcaccatcagatgcagcaacag
cagcagatacaacagcaccatcagatgcagcaacagctccagatctctgtcccctctcag
gtgtcaggtgcagcggtgcaccagctccaacagggtgcgctccagatccctgtcccccac
cctgcaggggggctggtggctgagagaagggtcagcgtggaacatgagcacctgctgaag
atcaaacccacccgctctgccccccagctggctgagggggacacggtggtgttcagcgcc
cctctggagctcagcaagatgaaccccccgcccccctaccctgggacggtggccgcagct
gcagcctctgccgctgctgcagcagccaacgccacctctggacaggctgggggcagtaac
ggcaccccgccgccagtggacctgtgcctgaagaagggcgagttctccctgtatcctcct
ggccagcaggcggcacagtacccaacgccgctaggctacgagcggataactacgttcgac
agcaggggtaacgtggaagaggtgtgccggcctcgaacgcggcttgtctgcaaccagaac
atttacacgctccaggtcccgggaagctcagcaaccctccgggttacctcttcttcttcc
tcaacagacgcgaagaagatccagctgccctacgcctcggcaaccctcaaccggctcacc
gttccccgctattccattcccagtggagatccgcccccctaccccgacacagccaatcag
aacaccacaggggggaggagcaccggacagaggctggacagcagtctgatccatgccaca
ctcaggcggaatagccgagaggccgctctcaaagtttcccagatgctggaccctcagagg
accctgcccactaaagccaaatcccaaaacgctgcactggcggcttcctaccaacaaagg
gtgcccaaagccctgtacacctgcagtcagtgcagtagtaacagcagtgggcttagcagt
gcagccagcagtgctcccagtgggactgcgaatggaatcgcaggaggtacaatcattaga
caggattttcctccagggaatggagctcctcacagcacggtgatcgtccactccaacagc
gcttctcccctagtctctcaatcctcatacaacctggatggctctgggaatggaggagga
ggtgggaacagagacagggctgactatgtgaactcagccttcacagaggatgaagcactg
agtcagtcattgaggcatctggcactagggggtgcagatgtgtctggactgacagtcaag
aggccaccgccataccagtgggacccagccaccactgaggaggtgtgggtgccccaggaa
cggactggtactctgagctctgctggccccaccggaccccacaaaccacccccgctcatc
ctcagcccagcccagcacctcgacatctcccgactgcctttcatcctctcccccaagtcc
cccaccagccccagtgctgcctctttccaggctgccgctgtagctgcaggttaccagatc
tcccttcagtatgctcctggcacaacctatagtgggccccagcagcagcccatgccaggc
tctccccgtctctgctcccctaaggaggtggtggccccggtccctttcaaccagcaggat
gccaccctggtcctcccacctggctatccagccaacctgtctaacctggcctgctgcccc
ctccctccaatgtacccggggggaagctcctgtgccgggctccccatcccccccattgcc
ctacacaccccctggggcacctacaacccctgcccccccatgcccagcccctcggggaca
ctgccccccatgccccccaagctctctcagatgatggtggacaagtcagtcctctctccc
cctcctcccccaccgcctccccctccaccgcccccagcagagctgcagctgcagggtcat
ggtggctcaccagaggccatggcaatggaggccggagagggcttccaggaggtgctctcc
ctcaacgagagccccgtgcccagcagtgctgagaagtttggcaagaagaaccgcaagcgg
gcagatggcagggctgaggaggccaatgcaccggccatcgccgagggaggaaaatccaag
aaggagggccgggccctgggtgacttcaactctctgatctccagcccgcggctgggcagc
agggaaaagaagaagcccaaaggccagaaggagcagcagctgaaagctaagaagctgagc
aaggctcccacaaacagcgagttccaggacagctcagagagtgaacctgagctcttcatc
agcggggacgagctgctcaaccagtgccagagcggcaagaagggctggaagagcaagagg
agcctacgggcggccagcgagctagaggagatcaagtgccgcaaggccaatgagaaggag
gaccgcgggttgggaagccagggctttgtttatgtgatggccaacaagcagccactgtgg
aatgaggccactcaggtctaccagctggactttgggggacgtgtcacacaggagtcggcc
aagaacttccagatcgaactggaggggagacaggtgatgcagtttggcaggattgacggc
aacgcctacatcctggacttccagtacccgttctctgctgttcaagccttcgcagtggct
ctagctaatgttactcaacgcctcaaatga
DBGET
integrated database retrieval system
