Oncorhynchus keta (chum salmon): 118387219
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Entry
118387219 CDS
T09424
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118387219
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118387219
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
SALM family
118387219
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118387219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
Ig_2
LRR_9
LRR_5
LRRCT
GP79
Motif
Other DBs
NCBI-GeneID:
118387219
NCBI-ProteinID:
XP_052379999
LinkDB
All DBs
Position
8:complement(34372140..34547193)
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AA seq
799 aa
AA seq
DB search
MDHILCCLLVLGTAVLMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFSDLETLRSLHLDNNRLIELGPDDL
RGLVNLQHLILNNNQLGRISDRALEDLAPSLEDLDLSYNNLRSLPWDSVKLMVSLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLKKLPPDPIFARAQDSLMMTTPYAPQLSLGIG
GNPLHCNCEVLWLRRLERDDDQETCASPSNLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQMANLRCEAIGDPTPTIHWMAPDDRVLGNSSRTVVYGNGTLEILITTSKDYGTFTCI
AANVAGESTASVDLSIIQLPHLSNGTGQASQPKSRLSDITGTTRISKGVPKTPPEKVVTV
SEVTAISALVKWTISKAAPKVKMYQLQYNCSDDEVLIYRMIPASSQAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIVILMVRYKATDHEGDGFGGSGKLTSVSDTHSQTNGGRLGQNGVPLPLPKPKAKVTLQD
EVVEFKCGSLQSTSSSSSSGGSVAGEGSYSPNSTLAIMWRQAAPSKPRANLDHLLGAFNS
LELRGAQGRGDLGEPSSSSSTPVAGGDRPHTDREPLLGRTMDSRLSRLLMLSHDSKPKRS
QSFDMGDCMDTDQQTDQAMASSTSTATTPVCSYPRRISNIWTKRSLSVNGMLLQCDEEGD
MGGSKGTFDSQEWVMESTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgttgatggcccacgca
tgcccaaagtactgtgtgtgccagaacctgtccgagtccctggggaccttgtgtccctcc
aaaggcttgctcttcgtcccactggacatcgacaggcgcactgtggagctccggctgggc
ggaaactacatcctccgcatcacccagcaggactttgccaacatgaccgacctggtggac
ctgacgctcagccgcaacaccatcagctacatccagcccttctccttcagcgacctggag
accctgcgctccttacacctggacaacaaccgtctcatagagctgggtcctgatgatctc
cggggcctggtcaacctgcagcacctcatccttaacaacaaccagctgggacgcatctcg
gaccgggccttggaagacctggcaccctccctagaggatctggatctgtcctacaacaac
ctgaggagcctgccctgggactcagtcaagctgatggtctctctccaccaattgagtctt
gaccataacctcctggacttcatccctgaggggacctttactgatctagagagactggct
cgcctggatctcacctccaaccgactgaagaagctgcccccagaccccatcttcgcaagg
gcccaggattcattgatgatgaccactccctatgccccccagctgtcccttggcatcggg
gggaaccccctgcattgtaactgtgaggtgctgtggctgcggcggctggagagggacgat
gatcaggagacatgcgcttccccttccaacctgaaggggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccacccctcatcactcagcacacccacaggatgctggtg
ctggagggccagatggccaacctgagatgcgaggccattggagaccccacccccaccatc
cactggatggcccctgatgaccgtgtccttggcaactcgtcccgaaccgtcgtctacggc
aacggcaccctggagattctcatcaccacctccaaggactacggtaccttcacctgcatc
gcggccaacgtggccggggagtccaccgcctcagtggatctgtcaatcatccagctgccc
cacctcagcaacggcaccggtcaggcctcacagcccaagtcccgcctctcggacatcacc
ggcaccaccaggataagcaagggggttccaaagacccccccggagaaagtggtcactgtg
tcagaggtgacagccatttcagccttggttaagtggaccatcagcaaggcagcgcccaag
gtaaagatgtaccaactccagtacaactgttccgacgatgaagtcctcatctacaggatg
atcccggcctccagccaggccttcctggtgaccaacctggtgtcggggaccaagtacgac
ttgtgtgttctggccgcctgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgtgcccagttctttacccgcgacgactacacacagtgccagtctctccacagccag
tttctggggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcgttattctgatggtacgctacaaggccaccgaccatgagggggatggcttcggg
gggagcggcaagctgaccagcgtaagtgacacccactcacagaccaatgggggccggctg
ggacagaacggtgtgccccttcccctgcccaaaccaaaggccaaagtgaccctccaggat
gaggtggtggagtttaaatgtggttccctccagagcacctcgtcctcatcctcgtcgggg
ggctcggtggccggggagggttcttacagccccaacagcaccctggccattatgtggagg
caggctgccccctctaagcccagggcaaacctggatcacctgctgggggccttcaactcc
ctagagctccggggggcccagggcaggggagacctgggggagccctcatccagcagtagc
accccggtggcgggtggcgataggccccacacggacagggagcccctgctgggccggaca
atggactcacggctgagccggttgctcatgctgtctcatgactccaaaccaaaaaggagc
cagtcgtttgacatgggggactgtatggatacagatcaacaaacagaccaagcgatggcc
tctagcacctccactgccacaacgccggtgtgcagttacccgcggcgcatcagcaacatc
tggactaagaggagcctgtctgtgaacggcatgctgctacagtgtgacgaggaaggggat
atgggggggagtaaggggaccttcgacagccaagagtgggtcatggagagtactgtctag
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integrated database retrieval system
