Oncorhynchus keta (chum salmon): 118387406
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Entry
118387406 CDS
T09424
Name
(RefSeq) synaptobrevin homolog YKT6-like isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04130
SNARE interactions in vesicular transport
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118387406
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118387406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387406
Membrane trafficking [BR:
oke04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
118387406
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
MA3
Motif
Other DBs
NCBI-GeneID:
118387406
NCBI-ProteinID:
XP_035631631
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All DBs
Position
9:23329740..23344338
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAFDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgccttcgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtaaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctcctggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcagacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtccgaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
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