KEGG   Oncorhynchus keta (chum salmon): 118387410
Entry
118387410         CDS       T09424                                 
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118387410
Enzymes [BR:oke01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118387410
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118387410
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118387410
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 Agenet 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 118387410
NCBI-ProteinID: XP_052382701
LinkDB
Position
1:complement(50389571..50478665)
AA seq 1181 aa
MSLTVPPDPTATMSLEASTPAPDLAPAPDLAPAPDLVPDPAPDLAPELTPDSAQAPELAS
DPAPTPAPPVPVMNPGCKIMTFRPTMEEFKDFAKYVAYMETQGAHRAGLAKVIPPKGWKP
RQSYDTIEEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRQLANSRTYCTPRHKDFD
DLERKYWKNLTFVSPIYGADVSGSIYDPEIGEWNIGHLNTLLDMVEQECGIVIEGVNTPY
LYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAQGFFPGSSQGCD
AFLRHKMTLISPSILKKYSIPFDRITQEEGEFMVTFPYGYHAGFNHGFNCAESTNFATLR
WIDYGKMATQCTCRKDMVKISMDVFVRCLQPERYEQWKQGKDGTVLDHQRPTTLNSPELE
HWRANRVTYREKLLQRALQKKEQLRRLKLEEVKVLAEEGIELDAVAYQRQVEEREAQRRQ
DREERMAREALETLEAMDREDRERQEALAAQAARGLPDPQVDPQHLTANGEKKKKKKKKK
KKQPALPSDPMNSFQAAFEKFATFKIPQPKGSNDTDLPAEGKLDVNGMQQSSSYSKQLKM
RMEVKKSRRHPLSKPPMRSPLSIVKQETSSDEELFSPWPLDGDVKKAGHLWQNRTPNFLA
EKGFNAAVATLEPYCAVCTLFCPYTQKDSSYPTDSPGAPNHHSVSRCGSRTHPLVPEMCF
SAGAGNTEPPPSNSHTGDDGTSPLLSCSSCSLQVHSSCYGVRPDTVHNGAWMCLRCTALA
WTADCCLCNLRGGALKMTTDNRWVHVICAIAVAEARFVNAVEREPVDISAIPENRKSLKC
VYCHKNTKQMCGACIQCSHDSCSTSFHVTCAHIAGVLMKPADWPYVVSVTCHKHKKTNHK
ARAGPRGEFSLGQKVIGRNSDGWFYPCTIIGMASHTFYEVNYDDGSYCDNLFPENIVSHD
CLRNGPPEMGELMLVHTAEGKALNASYVRDHVHKHYQVEFQDESQLLLKQTEIHSLEQDL
PKRVCARLAIPTQEGIMSGDEPQAAKRPRLPAPHPPPQALMDSTQQHLGRHPPATAPAPH
SITPTTPSHVPAPPNTDISAPTLTQALAIPIPEPTLNPMPALPDPCLADHLPAAPLLPLS
PDMPSQHQGEVYTPSSSYVSYMETLLNAHFPPQEKGPGPLF
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgtcattgacagtgccaccagatccaactgccaccatgtcgctggaagcgtcaacccca
gcgccagacctagccccagcaccagacctagccccagcaccagacctggtcccagatcca
gccccagacctagctcctgaattaaccccagattcagctcaagccccagagctagcttca
gatccagcccctaccccagctcctccagtcccagtcatgaacccggggtgtaagatcatg
accttccggccaaccatggaggaattcaaggactttgccaaatacgttgcctacatggag
actcaaggagcacaccgtgcaggcctggcaaaggtgattcctcctaagggctggaagccg
cggcagtcgtacgacaccatcgaggagatggtgatccctgctcccatcatgcaggtggtg
acgggccagtcgggcctcttcacccagtacaacatccagaagaagtccatgaccgtcggg
gagtaccgtcaactggccaacagcagaacgtactgtactccccgacacaaggactttgac
gacctggagaggaaatactggaagaacctcacctttgtttctcccatctacggcgccgac
gtcagcggctccatctacgacccggagatcggtgagtggaacatcggccacctgaacacg
ctgctggacatggtggagcaggagtgtggcatcgtgatcgagggggtgaacacgccctac
ctgtactttggcatgtggaagaccaccttcgcctggcacacagaggacatggatctctac
agtatcaactacctccactttggagagcccaagtcatggtactccgtcccacctgagcac
ggcaagaggctggagagactggcgcaaggtttcttcccaggcagttcccagggctgtgac
gccttcctccgccacaagatgactctcatctccccatccatattgaagaagtacagcatc
cccttcgacaggatcactcaggaagaaggtgagttcatggtcacctttccctacggctac
cacgccggtttcaaccacggcttcaactgtgccgagtccaccaactttgccaccctgcgc
tggatcgactacggcaagatggcaacgcagtgtacgtgtcgtaaggacatggtgaagatc
tccatggacgtgttcgtacgctgcctgcagcccgagcgctatgagcagtggaaacagggc
aaggacggcaccgtgctggaccaccagcgacccaccaccctcaacagccccgagctggag
cactggagggccaaccgggtcacttaccgggagaagctgctccagagagctttgcagaag
aaggagcagctgcgccggctgaagctggaggaggtcaaggtgctggcggaagagggcatc
gagctggacgccgtggcctaccagcggcaggtggaggagcgcgaggcccagcggcggcag
gacagggaggagaggatggcccgcgaggccctggagaccctggaggccatggatagagag
gaccgggagaggcaggaagcccttgccgcccaggccgcaagaggcctaccagacccccag
gtagacccgcagcacttgacggcgaatggcgagaagaagaagaagaaaaagaagaagaag
aagaaacaaccagccctgccgtccgaccccatgaactctttccaagcagcttttgagaag
tttgcgacgtttaaaatcccgcagcccaaaggcagcaatgacacagacctaccagcagag
ggcaagcttgatgtgaacggtatgcagcagtcatcgtcttactccaagcagctgaagatg
aggatggaggtgaaaaagagtcgccggcaccccctcagcaagccccccatgcgatcccca
ctctccatcgtcaagcaggagacatctagtgacgaagaacttttctccccctggccactg
gatggcgacgtgaagaaagcaggccacttgtggcagaaccgcacgcccaacttcctggcc
gagaagggtttcaacgcggccgtggccaccctggaaccctactgtgccgtatgcactctg
ttctgtccgtacacacagaaggactcctcctacccgaccgacagtcccggtgcccccaac
caccacagcgtatcccgctgcggcagccgtacccatccgctggtccccgagatgtgtttc
agcgccggggcaggcaacaccgagccgccgccctccaactctcacacgggtgacgacggc
accagcccgctgctctcctgctcctcctgcagcctgcaggtccactccagttgttatggt
gttaggccggacacggtacacaatggggcctggatgtgtttgagatgcacagcgctcgcc
tggacagcggactgctgtctgtgtaacttacggggaggcgctttgaagatgaccacggac
aaccggtgggtccatgtgatctgtgccatcgctgtggccgaggcccgcttcgtcaacgcc
gtcgagagggagccggtggacatcagcgccatcccagagaacaggaagagtctgaagtgt
gtgtactgccataaaaacaccaagcagatgtgcggcgcgtgtatccagtgttcccacgac
agctgctccacctcctttcatgtcacctgcgctcacatcgccggcgtgctcatgaagccc
gccgattggccctacgtggtgtccgtcacgtgccacaagcacaagaagaccaatcacaag
gcgagggcggggccaaggggggagttttctctgggccagaaggtgattggtcggaacagc
gacggctggttctacccctgcaccatcatcggcatggcgtcgcacaccttctacgaggtc
aactatgatgacggctcctactgcgacaacttattcccagagaacattgtgagtcatgac
tgtcttcgtaacggcccgccagagatgggcgagctgatgttggtccacaccgcggagggc
aaggcgctcaacgcctcctacgtcagggaccacgtccacaagcactaccaggtggagttc
caggatgagtcacagttgttactgaagcaaacagagatccattcgctggagcaggacctg
cccaaaagggtctgcgcccgcctggcaataccaacccaggaaggtattatgtcaggagat
gaaccacaggcagccaagcggcctcgcctccccgctcctcaccccccacctcaagccctc
atggactcaacgcagcagcacctcggacgccaccccccagctacagccccagcacctcac
agtattacacccactacccccagccatgtgcctgctccccccaacactgacatcagtgcc
cctaccctcacacaggctctggcaatacccatccccgagcccacccttaacccaatgccc
gctctccctgacccctgtctcgctgaccatctcccagccgcccccctgctgcccctgtcc
ccagacatgccctcccagcaccagggcgaagtctacacgcctagctccagctacgtatcc
tacatggagactctgctcaatgcacatttcccccctcaggaaaagggccccggtcccctg
ttttaa

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