Oncorhynchus keta (chum salmon): 118387444
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Entry
118387444 CDS
T09424
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118387444 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118387444 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118387444 (tnca)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118387444 (tnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_1st
EGF
hEGF
NDNF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
118387444
NCBI-ProteinID:
XP_035631686
LinkDB
All DBs
Position
9:26842218..26887958
Genome browser
AA seq
2389 aa
AA seq
DB search
MSTKSILGCLFLTLLFSLCQSGLVRKILRHKRATLTATGGDNITLPSADQPVVFNHVYNI
NVPASSLCSVDLDAPGSTSLEPQDAVPPSGLHTTEHTMDGQNQIVFTHHINIPQQACACT
ERFPDLKDLLSRLEILEGELSTLRDQCTTGDSGFCSAQPVTGEVGTKPYCNGRGNYSADT
CGCICKPGWKGPNCTESECPNDCQDQGRCIDGKCICFEGFGGNDCLLEVCKVDCGENGQC
IGGVCICAEGFIGEDCSQTDCLNNCQGRGKCVDEECVCEEPWTGSDCSELICPNDCYDRG
HCVNGTCYCEEGFTGEDCGETTCPSDCMSHGFCVNGQCVCSAGYTGEDCSKLTCPSDCND
RGTCFNGMCICDAGYQGEDCSQLACLNNCHNRGQCVNGQCHCDVGYQGEDCSELSCPNNC
LNRGRCVNGQCVCDEGFGGEDCSIKTCPSDCYGRGDCVDGQCVCYAGFTGEDCSELSCPN
NCLNRGRCVDGQCVCDEGLTGEDCSEKRCPNDCLGQGYCVDGKCVCQDSYAGDDCSGLIC
PDNCNIRGLCVNGKCICEEGYVGDNCGELSCLNNCQDKGRCVNGQCLCEEGYIGEDCSEV
SPPKGLTVTEVTTETVDLTWNNEMLVTEYLITYVPNGPGGLYQEFTVGGDKTAATVSELE
PGIEYLINVYAILSNKKSIPISARVATYLPEPEGLKFKSVRETSVEVLWDQLDIPFDAWE
LYIRNTKEESGKTLTTLPSSQTLYEQTGLGPGQEYEVSVGVIKNNTRGPQSTKIITTRID
GPRQVEMRDVTDSSGLVTWFQPVAQVDGVTVSYGPSSDPTERTSVDLSTSDKQYSIDSLS
PDTEYQVSLVSRRGNSTSDPVTEIFTTDLDSPKDLQPLGQTDNSVTLEWKNSRADVDSYR
VKYSPISGGSHGEEVFPRGPGGNTQATITGLKPGTEYGIGVTAMKNERESLPATTNAATN
LDGPKDLEVSESTETSMTLVWKRPRAKIPVYRLVYISKDGRREEVEVPGTATSYNLNNLT
PGMMYTITLVAEKGSKKSTPATLSASTASFTFYIANPAPELTTPIGSEDNIISFVSLDPS
DPDLQISGMGLELEDKLGELTVSVVTSEGFELSWEPKAHVVYDSYILECRDTLGLWDVKE
VHLHGDAKGSRFQGLRESTEYRVKLYGVSNSQRSSPLEAVTVTAPKSTSTDVVALSVKSA
QTTQSPDTGAVHPTVLPLAPLITEGPTSTSLYPTGDIPSGAESEPEASSLETLGDLNVTD
VSPTSVRLAWSAPDEAFDSFLVEVNALSGMAQAHVTTVPGSARKTLIEGLSPGTRYEVSL
YGKVEGEQSLPLHAFANTEELRPVVANLTVSDVTWDSFNVYWTPEDGEFESFVIEVTNLE
GGPESENLTLSADAFNLGISGLSPNTLYRIGLYGLHQGSFQEPVYTEATTVSEPVVGNLY
VSNLTSESFSISWNGTEGEFDGYVLEIIDSDWLKEPKEYNISQNAMSHDITGLRPSTDYI
AYLTGIVKGSRTHAVSIIASTAAEPDLSRLVVSNVTSDRLSLSWRRGEKAFDNFIVEVRE
SALPSQAMGRTLPGAARTTVMTGLKGSTTYDIKLYASSAGQNTQPLFAVVTTEAVPQLGS
IAVSESSHDNFTLSWGTVAGHFDGFVIRVGDPEQLFDTLEFTPSGEVRNITVTGLVDATD
YDIELYGISHGRRTPSVLAHAVTASLPKVENLTISEITPFGFRVSWRAHHPQHQEGAPST
GGFGHFHIVVSDSGWLLEPQEFIVPGNQSFLDIWGLITGIGYEVRLTGVSSTGLVSRPLT
TVAVTEAEPEVEHMFVSDITSDSFRLAWTADEDMFDRFVIKIKDSTKFAHPQEVNVLGDE
RTKILTGLTGGTEYEIELYGVTLEQRSQPITGVARTGLGAPRGIRFSEVTESSAIVHWIM
PRARVDNYRIIYVPLQGGSPMTVLADGTETQAMLPNMLPGVTYQVTIFAGKGLEESDPGT
ENITTALDRPQALSAVNVTDTTALLLWQPAQATVDGYVITYSADSVSPVMEHVSGNTVEF
EMGSLVPATHYTVGVYAMREAQKSGTITTEFTTDVDSPRDLAATNVQTDGATLTWKPPRA
AITGYILTFTSPDGTVREVALSPTATSYSMSELSGSSEYSVRLQAIAGAQRSRHVTNVFT
TIGGLYRYPKDCSQALLNGDTISGTYNIYLGGDESQPIQVYCDMTTDGGGWMVFLRRQNG
NLEFFRNWKNYTGGFGDMNDEFWFGLANLHKMTASGQYELRVDLRDNGKSAYAQYDKFTI
AEPRSRYKIYLGRYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRV
NLMGKYGDNSHSKGINWFHWKGHEHSIQFVEMKIRPVNFRNVESRRKRS
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaaaagcattctaggctgcctcttcctgactctccttttcagcctctgccaa
tctgggctggtgagaaaaatacttaggcataaacgggcaactctgacagccacgggagga
gacaacataaccctccccagtgctgaccagccagtggtcttcaaccatgtctacaacatc
aacgtccctgctagctccttgtgctcagtggacctggatgcgccaggaagtaccagcctt
gagccccaggacgcagttccgccatcaggcctccacaccaccgaacataccatggatggg
cagaaccagattgttttcacccaccacattaacattcctcagcaggcgtgtgcatgcacc
gaacggttcccggatctgaaggacctcctgagcaggttggagattctggagggagagctg
tccacgctgagagatcagtgtactactggagactctggcttctgcagcgctcagccagtc
acaggtgaagtggggaccaagccttactgcaatggccgtggcaactacagtgctgacacc
tgtggctgtatttgcaagcctggctggaagggacccaactgcactgagtctgaatgcccc
aatgactgccaggaccaaggtcgatgcatagacgggaaatgcatctgcttcgagggcttt
ggcgggaacgactgtttgcttgaggtttgcaaagtggactgtggtgagaacggacaatgc
attggcggggtctgcatctgtgccgagggtttcattggagaggactgttctcagacggac
tgcctgaacaactgccaaggccgtggaaagtgtgtagatgaggagtgtgtgtgtgaagag
ccctggacgggttctgactgctcggaactcatctgccccaacgactgctatgaccgtgga
cactgtgtcaatggaacctgctactgcgaagaaggtttcaccggggaggactgtggggag
acaacctgccccagcgactgcatgagtcatggtttctgtgtgaacggccagtgtgtctgc
agcgctggctacaccggagaggactgctccaagctcacctgccccagtgattgcaacgat
agaggtacctgcttcaatggcatgtgtatctgcgatgctggctaccaaggagaagactgt
agccagctggcttgcctcaacaactgccataacagggggcagtgtgtcaatgggcagtgc
cattgcgacgtaggctaccagggagaggactgctctgagctctcctgccccaataactgc
ctcaaccggggccgctgtgtcaacggacagtgtgtatgcgatgaaggctttggtggagag
gactgcagtattaagacctgcccctcagactgctacggccgtggagactgtgtggacggc
caatgtgtctgctatgctggcttcactggtgaggactgcagcgagctgagctgccccaac
aactgcctgaaccgcggacgctgcgttgacgggcagtgtgtctgtgatgagggcctcaca
ggggaagactgcagtgagaagcgctgtcccaatgactgcctgggccagggatactgtgtg
gatggaaaatgtgtctgccaggacagctatgcaggtgatgactgctctggactcatctgc
cctgataactgcaacatcaggggactctgtgttaatgggaaatgcatttgtgaggaggga
tacgtgggagacaactgcggagagctgagctgcctcaacaactgccaggacaaaggccgc
tgtgtgaatggacaatgtctctgtgaagagggatacatcggagaagactgctcagaagtt
tctcctccaaagggcctgaccgtaacagaggtcaccactgagacagtggacctgacctgg
aataatgagatgctggtgacagagtatctgatcacttacgtgccaaatggtcctgggggt
ctgtatcaggagttcacagtgggcggagacaagactgctgccactgtcagcgagctggag
cctggcatcgagtacctgatcaacgtctatgccatcctcagcaacaaaaagagcatccca
atcagcgccagggtggccacatatctgccagaaccagaaggcttgaagtttaaatcggtg
agggagacctcagtagaggtgctgtgggatcagctggacattccttttgatgcctgggag
ctctacatccgcaacacgaaagaggagagtgggaaaacccttaccacccttccatcctcc
cagaccttgtatgagcagacggggctaggtcccggtcaggagtacgaggtttcagtgggc
gtcatcaagaacaataccaggggacctcagtctactaaaatcatcactaccaggattgat
gggcccaggcaggtagagatgcgtgacgtgacagacagctcaggcttggtcacctggttc
caacccgtggctcaggtggatggtgtcaccgtgtcctatggccccagctccgaccccaca
gagaggaccagtgtggacctgtccacctcagacaaacagtacagcattgacagcctcagc
ccagacactgagtaccaggtgtccctggtctccaggaggggaaacagcaccagcgatcca
gtcactgagatattcaccacagacctggactctcctaaggacctgcagccactgggccag
acagacaacagcgtcacactggagtggaaaaacagccgggcagacgttgacagctaccgg
gtgaagtacagccctatctctgggggttcccatggcgaagaggtgttcccccgtgggcca
ggaggcaacactcaggcaactatcactggattgaagccgggtacagagtacggaattggt
gtgaccgccatgaagaacgagagggagagcctgcctgccaccacaaatgcagcaacaaac
cttgatgggcccaaggacttggaagtgagcgagtccacagagaccagcatgacgctggtg
tggaagagaccccgagccaagatccccgtctacaggctggtgtacatctccaaggatggc
cggagggaggaggtggaggtccctggaacagccacctcctacaacctaaacaacctgacc
cccggaatgatgtacaccatcaccctggttgctgagaagggctcaaagaagagcacacct
gccaccctgtccgcatctacagcctctttcacgttttacatagccaaccctgcccctgag
cttaccactcccataggctcggaggacaatatcattagttttgtgtcgttagacccctct
gacccagacctacagatctcagggatggggcttgagctcgaggataagctgggagagctg
actgtctcagttgtaacgtccgaaggatttgaactttcgtgggaaccaaaggcacatgtt
gtctatgatagttatattttagaatgtagagacactctgggattatgggatgtaaaagag
gtccatctccatggagatgccaaaggttctagatttcaaggcctgagggaatccacagaa
tatcgagtaaagctttacggagtaagcaatagccaaagatcctctccgcttgaagcagtc
acagttacagcacccaagtctacctctactgatgtagtcgctctgagtgtcaaaagtgct
cagacgacacagtctcctgacacaggagctgttcatccaacagtccttcccctggctcct
ctgatcacagaggggcctacatctacatctctgtaccccacgggggacatcccctctggg
gctgaatctgaaccagaggcctccagcctggagacgctaggggacctcaatgtcacagac
gtgagccccactagcgtaaggctagcctggtcagccccagatgaagcctttgatagcttt
ttggtggaggtgaatgctctgtcagggatggcacaagctcatgtgaccacggtaccagga
agtgccaggaagacccttatagaaggcttgtcccctgggacacgttatgaggtttcgttg
tatgggaaggtggagggggagcagtctctgcctcttcatgcttttgccaatacagaggag
ctgaggcctgtggtggccaacctcacagtctctgacgtgacatgggacagcttcaatgtg
tactggactcccgaggacggggagtttgagagctttgtcattgaggtgacaaacttagag
ggaggtccagagagtgagaacctcaccctgtcggctgatgccttcaacctgggcatttct
ggcctgagtcctaacactttgtataggattggcctgtacgggctccaccagggctccttc
caggagccggtgtatactgaagccactacagtgagcgagccagtggttggcaatctgtat
gtatctaatttaacgtcagagagtttctccatctcctggaatggcactgagggagagttt
gacggttatgtcctggagattattgattcagattggctgaaggagccaaaggaatataac
atatcccagaatgcaatgtctcatgacatcacagggctaaggcccagcactgactatata
gcctacctcactgggattgtcaagggatcacgaacccatgccgtcagtattattgcatca
acagctgcagagcctgacttgtccaggctagttgtttctaacgttacctcagacagactt
tcactgtcatggaggagaggggagaaggcttttgataactttatagtagaagtcagagag
tctgctttgccctcgcaggccatgggccgcaccctgcctggagcggctcgcaccacagtt
atgactggcctcaaagggagtacaacctacgacatcaaactgtacgctagctccgctgga
cagaatacacagcccctattcgctgtagtcaccacagaggcagtcccacagttgggctca
atagctgtgtccgaatctagccacgataacttcaccctgtcctggggcacagtggctggt
cactttgatggctttgtcatccgggtcggtgaccctgaacagctgtttgatacactggag
ttcacgccgtctggcgaggtccgtaacattacagtcactggcctagtggacgccactgac
tatgacattgaactgtacggtatttctcatgggcgccgcaccccttctgttttagcccat
gccgtcacagcatcattacccaaagtggaaaacttgaccatttctgagatcaccccattc
ggcttccgcgtgtcctggagggcgcatcatcctcaacaccaggaaggggctccctctact
ggtggcttcggccactttcacatagtggtgtcagactcaggctggctactggaacctcag
gagttcattgtccctggcaaccagagcttcttggacatctggggcctgatcactggcata
ggctatgaggtcaggctgactggggtatccagtactgggctggtctcccgcccactgacc
acagtggctgtgacagaggctgagccagaagtggagcacatgtttgtctcggacatcact
tcagacagtttccgcctggcctggaccgcagatgaagacatgtttgatagatttgtgatc
aaaattaaggactccacaaagtttgcgcatccgcaagaagtcaacgtccttggtgacgag
cgaaccaagattttaacgggactcaccggcggcaccgagtacgaaatcgagctgtacggt
gtcactttggaacagcgctcccaaccaattaccggtgttgctcgaacaggcctgggtgct
ccaagaggcatccgcttctctgaagtgactgagtcctcggccatagtacactggatcatg
cctcgtgccagagtggataactaccgcatcatttatgtgcctctccaaggaggcagccca
atgacagtgctagcagatgggactgagacccaggccatgttgcctaacatgttgccagga
gtgacctatcaggtcaccatctttgctgggaagggcctggaggagagtgacccggggaca
gagaacatcaccacagctctggacaggcctcaagctctttctgctgtcaacgtcactgac
acgaccgccctgctgctatggcaaccagctcaggccactgtcgatggctacgtcatcacc
tacagcgcagattcagtgtccccagtgatggagcacgtttctgggaacacggtggagttt
gagatgggctccctggtccctgccacacactacacagtaggggtgtacgccatgagggag
gcacagaagagtggcaccatcaccactgaattcacaacggatgtggattctcctcgtgac
ctggcggccactaatgtccagacagacggtgccactctcacctggaagcctccgcgtgcc
gccatcaccggatacatcctcaccttcacctcacccgacggcacagtccgggaagttgcc
ctgagccctacagccacatcgtacagcatgagtgagttgagtggctcttcagagtatagc
gtcaggctacaggccatcgctggagcccagcggagccgccacgtcaccaatgtcttcacc
accattggaggattatacagataccctaaggactgctcgcaggctctgctgaatggagat
acgatctctggcacctacaacatctacctgggaggggacgaaagccagcccatccaggtc
tactgtgacatgaccacggacggaggaggatggatggtgttcctgaggcgccagaatgga
aatctggagttcttcaggaactggaagaattacaccggtggctttggggacatgaatgat
gaattctggtttggtctggccaacctccacaagatgacggcatcaggccagtacgagctg
cgtgtggacctgagggacaacgggaagtcggcctacgctcagtatgacaagttcaccatc
gcagagccacgtagccgctacaagatatacttaggaagatatagcggcacagcaggtgac
tctatgacctatcaccatggtcggcccttctccacgtacgacaatgacaacgacattgca
gtaaccaactgtgcactgtcctataagggtgccttctggtacaagaactgccatcgtgtc
aacctcatgggaaaatatggtgacaatagtcacagcaagggtatcaactggttccattgg
aagggacacgagcattcaatccagttcgtcgagatgaagattagacccgtcaacttcaga
aacgttgaaagccgacggaaaagatcatag
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integrated database retrieval system
