Oncorhynchus keta (chum salmon): 118387613
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Entry
118387613 CDS
T09424
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118387613 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387613 (depdc5)
Membrane trafficking [BR:
oke04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
118387613 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
118387613
NCBI-ProteinID:
XP_035632047
LinkDB
All DBs
Position
9:complement(35160872..35192793)
Genome browser
AA seq
1606 aa
AA seq
DB search
MKNKTYKLVVHKKGFGGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKED
LQKETISVDQTVAQAFKLRAYQDVVVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL
VSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCEM
WDFDIYGDLYFEKAVSGFLSDLFAKWKERYCSHEVTVVLFSRTFYNAKTLEEFPEILRGS
IRQDHEGRFYEDFYRVVAQTERRDEWTSLLVTIKKLFIQYPVLVRLKEAVGFPSGHNSTA
AQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNG
IGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHWINHSFYTSKSQNSCSCFTP
RIKLAGRKLHAEKFKNNKEHTLGAPKDENSLPIQVDYDAHDAQVFRLPGPSRAQRSTNFR
VVREREVSGRRSWGSADVSGVLGGGVSPPVRSCGPDEQRSLASDDSLGRVSNILLIPRLP
PAQYGEVSSSLGYTSTRELLEKMMESQRDSSAPGRFTVGSAESTLHVRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDPAHTSAELL
ELAYHEATGRRTASERRQAGENGLYSSGGMEEYTHGSPASSNSTGTPVNRGSSLEDFSSG
SPDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPEWQTLQNDYTEGCYDLLP
HTDLERRDDEAPVMSAPQVFEEFICQRLMQGYQIIVQPNKRKPQPAVAPPLSSSPLYTRG
LVSRRRPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYTYSLCPPHSD
AHFLSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDVYGEGVGTVAGREGMTGTGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGPAM
KGLQVTGPLSAYPPEPVAPPLGKKGTSALSALLELEQNQKTLEEQQQQGKPSAATSESST
VTMTTTYVDSPRKDAAFILDFIRSPRSSYIYHTQVSTDPAEGGATDKGGQVGAGVVATGG
AAAQTTGDTGPSLATETSGQSGTGALCLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPPN
CFISAEIVHWLVNNVEGVATQGMAVDIMQKMLDEGLVTHASGDAMRTFVYGFYFYRIVAE
KDCERGPTSQLPPPVAQGWSTAALEDFALFQRKWFEVAFVLEERRTCDLPAFLLPWLPSR
PASYASRHSSFSRSFGGRSQAAALLAATVPEQKTATLDVDVNNRSDRTEWCSCYYHGNFS
LNAAFEVKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQL
FIPLHIHRLLRDGSDNLFEGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPSENK
PQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTASASQGLFGSEELVGYYWAYNTMLTKA
WRTGVLGDEKLADRLLRDFTDFCANKEKRLVNFWDSCQEKMNASAP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaacatacaaacttgtggtgcacaagaaaggctttggaggcagtgatgat
gagcttgtggtgaaccccaaggtgttccctcaagtttcccttggggacataattgagatt
gcacaccccacagatgaatacagccctctcttgctgcaggtgaagagtctcaaagaagac
ctccagaaagagacaatcagtgtggaccagactgtggcgcaagccttcaaactccgggca
taccaggatgtcgttgtaaacattgtggatccaaaggatgtaactctggacctcgtagag
ctcacgttcaaagaccaatacattggaaggggagacatgtggcgactgaagaagagtctg
gtgagtacctgcgcttatgtgactcagaaagtggaatttgcagggatcagagcccaggcc
agtgagttatgggtgaaaggagagaaggtcacctgtggctacatcagtgaagacaccagg
gtggtgttcaggtcgacctctgccatggtgtacatcttcatccagatgagctgtgaaatg
tgggactttgatatctacggggatctctactttgagaaagcagtcagtggttttttgtct
gatctttttgccaaatggaaggagaggtattgcagccatgaagtgacagtggtgcttttc
tcacgtactttctacaacgctaaaaccttggaggagtttcctgagatattgagaggttcc
atcagacaggaccacgagggccgtttctatgaagatttctatagggtagtggctcagact
gagagacgtgatgagtggacctctctgctggtcaccatcaagaagctcttcatccagtat
cctgtcttggtgcggctaaaagaagcggttggtttcccctccggccataactctactgct
gctcaggggaattaccttgaggccattaacctgtctttcaacgtctttgacaagcactac
atcaaccgcaactttgaccgcaccggtcagatgtctgtggtcatcaccccgggggtgggc
gtgtttgaagtggaccgacttctcatgatcctaaccaagcagcgcatgattgacaatggt
atcggtgtagacttggtgtgtatgggagagcagccacttcatgcagtgcctctatttaag
ctgcacaacaggacagtgcctggagactcacgactgggtgatgactacaacctgccccac
tggatcaaccacagcttttacacatccaaaagccagaactcctgcagctgcttcactcct
cgcatcaagctggcaggacgcaagctccatgcagaaaaattcaagaacaacaaagagcac
actcttggggctccgaaggacgagaacagccttcccatccaggtggactacgatgcccat
gatgcacaggtgttcagactccccgggccgtcccgagcccagaggagcaccaacttcagg
gtggtccgagagagggaagtgagtggaaggagaagctgggggtctgcggatgtgagtggg
gttctagggggcggtgtgtccccccctgtccgctcttgtgggcctgacgagcagcggagc
ctggcctctgatgacagcctgggcagggtgtccaacatcctgctgatcccccgtctgccc
ccagcccagtacggagaggtcagcagctccctgggctacaccagcaccagagagttgttg
gagaagatgatggaatctcagcgggactccagtgctccagggaggttcacggtggggagt
gctgagtccaccctccatgtgcgcccagggggctacacccctcagagggccctcattaac
ccctttgccccctcacgcatgcccatgaagctcacctccaaccgcaggcgctggatgcac
accttccctgtgggtccgtcaggagaggccatccagatccaccaccagaccagacagaac
atggctgaattgcagggcagcgagcagagagaccccgcccacacctccgccgagctcctg
gaactggcctatcacgaggccactggcagacggacagcctcagagagacgacaggcagga
gaaaatgggctgtactccagcggagggatggaggagtatactcatggcagcccagccagc
agcaacagcactggaacaccggtaaaccgtggctcctccttggaggacttttcctctggc
agtccggatccaaccctgctgctgtctgcccccccgacagtgcctagcttctgttgcacg
gtgggggtagactggaagtctctgaccacacccgcctgtttgcctctcaccactgactac
ttccctgaatggcagaccctgcagaacgactacactgagggctgctacgacctgctgcca
cacactgacctggagaggcgggatgatgaggccccggtgatgagtgcccctcaggtgttt
gaggagtttatctgtcagcggctgatgcagggctaccagatcattgtccaacctaacaaa
aggaaaccccagcctgccgtggccccgcccctcagcagtagcccactctacaccagaggg
ctggtctctcggcgcaggccagaagaggaggagagtctgtactggctcagtatgggccgt
accttccataaagtctgcctgaaggataaaatcatcactgttacccgctaccttccgaag
tacccgtatgagtcggcccagatccagtacacctacagtctgtgtccccctcactctgac
gcccacttcctgtcctgctgggtggagtttggtcacgagagactggaggagtacaagtgg
aactacctggaccagtacatctgctctgctggctctgaggacttcagtctgatagactct
ctgaagttctggcggacccgcttcctgctgctgccggccgggggggctagacgtgtggcg
gacggggagggacactgggacgtttacggggagggagtgggcacggtggcgggcagagag
ggcatgacgggcaccggggactgggccctgctggatggcttcatccgcttcctggaggga
ctcaaccgcatccgcagacgccaccgctctgacaggatcatcaggaaaggaccggcgatg
aagggtttgcaggtgactggtcctctctctgcctaccctccggagcctgtagcgccccct
ctgggcaagaaaggcacctccgctttatcagctctcctggagttggagcagaaccaaaag
actctagaggagcagcaacaacaggggaaaccctcagctgccaccagtgagtcttccact
gtcaccatgaccactacatatgtggacagccctcgcaaggatgctgccttcattttggat
tttatacgtagccctcgttcctcctacatctatcacacacaggtttctacagatcctgct
gaaggaggggccacagacaaaggtggtcaggtaggggctggggtggtggcgaccggtggg
gctgcagcccagacaacaggggatacaggacccagcttagccacagaaaccagtggacag
tctggtactggagccttatgtttgtcctcatcctccaccctgatggaaatactagaggcc
atcaaacaccccacaacaggtgtgcagcttctacctgagcagaagggcctgccccctaac
tgcttcatcagtgctgagatcgtccattggctggtcaacaacgtagagggtgtggccaca
caaggcatggctgtcgacatcatgcagaagatgctggatgagggcctggttacccatgca
tcgggggatgccatgaggacctttgtctatggcttctacttctacaggatagtggcagag
aaagactgtgagcgaggccctacatcccagctgccccctcctgtggcacagggctggtca
acggcagccctggaggactttgccctgtttcagaggaagtggtttgaggtggctttcgtc
ctggaggagcgtcgaacttgtgacctcccggccttccttctgccctggctgcccagccgg
cccgcctcctatgcaagtaggcacagctccttcagccgcagctttggaggacgcagccag
gccgcagcactgctagctgccactgtaccagagcagaagacagccaccttggatgtggac
gttaacaatcgtagcgaccgcaccgagtggtgcagctgctattaccatggcaacttctcc
ctcaacgctgccttcgaggtcaagctgcactggatggccgtcactgcagctgttctcttt
gagatggtccaaggctggcacagaaaggctgcctcctgtgggttcctgttggtgcctgtc
ctggaggtgccctttgccctaccctcctacctatatggtgacccgctgcgggcccagctc
ttcatccctctccacatccaccgtctgctgagggacggcagcgacaacctgtttgagggg
tttgaaccagagacgtattgggatagaatgcagctctttcaggaagccatactataccga
ttcggttttgtccaagacaagttttctgcctctgctttcaacttcccatcagagaacaaa
ccccaatacatccacgtaacaggcacagtgttcctccagctgccctactccaagaggaag
tactctagcgggcagcagcggaggaggaggaattcaacagcatcagccagtcagggcctg
tttggctcggaagagctggtgggttactactgggcctacaataccatgctgaccaaggct
tggaggacgggtgtgcttggggatgagaagctggctgaccgcctgctcagagacttcact
gacttctgcgccaacaaagaaaagcggctggtgaacttttgggacagctgccaggagaaa
atgaacgctagtgctccatga
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integrated database retrieval system
