Oncorhynchus keta (chum salmon): 118387655
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Entry
118387655 CDS
T09424
Symbol
rab11fip1b
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118387655 (rab11fip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387655 (rab11fip1b)
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118387655 (rab11fip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
118387655
NCBI-ProteinID:
XP_052381718
LinkDB
All DBs
Position
9:complement(35997029..36022107)
Genome browser
AA seq
1579 aa
AA seq
DB search
MSLSDQSQQWYPTSVQVTVLQARSLRIKGKNGTNDAYAIMQVAKDKFATSVAEKSVVPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGSDKLLGHAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVLVDIQFMKNNLTASMFDLSATDKPRSRLGKFKDKVRGKKKEGLSD
SASAVVPSFTQVLTDSEGEGEGEGGADKEEKKKKNKLKSLFSSKSNLQRHGLSQSMSVLG
PLPEKDSSLSGSPSGLNEDSSEGKNKFKFLTHKRTGSSDSKASQGSLSLGRSKIHAPLAE
QSNLCINGSHLYTEHPHPRSARTGSTFSLASSGHGSMEDLRRAQGRKSSSTSMDSLTALK
QPSPWAEGESSRAEEDEEEEDRVKMDEMKRKEEQERKKLEEERMRKEEQEKRRIGKEVER
LRFEEEEKTRKEEQENRKRMEEEEKIRVEEESRMLEERKRRLKEEGEERVKKKEQEMIRL
QEEQERWEEEERMRREEHERMKREDRLRKEDERKMREEERLKREKEERIKEEEERIRREQ
EEDMQRREERQRKMREEEERLRMEEEMREEEVRVKREQDRLREEERRVREEEERVRKAEE
EDRLRAEMGIKRTEEEERIKRDRLRKEEEESKIRKQEERIRILEEEMLRKDEEQRKIREE
EERIRRLEEEMLRKEEEERTIREEEERIRRFEEEMLRKDEEEREIREEEERIRRLEEERI
RRVEEERLRKDEEERKIREEEERIRRFEEERLRKEEEERKIREEEERIRRFEEEMLRKEE
EERKIREEEERIRRFEEEMLRKEEAETMRLEEERGNEQERSDKEQKERFRVEEENMKTEE
LRQEEKRRNAQMEEEQRREEARAPLEEVEKQMEQYSEAKVTVCNNPFEEVSPTSSFDDSS
SNNLFEENPMTTTGPISCRINKVSAVKPRPSSWGNPSKPAISSNPFLSSSSPELESSMDS
PRGARENRDAIDPSANLMEKKDPAPVAPINQPWARKDNWSSKSHCATPTLAKTKPTKPPP
PLRCQSSTALVGSGDDQGSVSGKDHSSVRQDKGPAPLPPDNQRWAHKDNWPSKSNPGSAT
PTLTQKTPTKPQPPPRRHSATSLVGSEHDLHLNESVSQGDSGVRGDKRPAPLPPDRPNQA
PSQIQRDQSMASVNRGHKDRVDASMSKVSQRVVQMITPLRSSSTATTEHISGGQSSTHHG
NQAEEPMPSATGGLVVAKHNKGPAPSRPQHLPGKTMPTPTVDVLDEQSNTEEHDSSVEFG
PNNPFAEDCRMEKSSGCGVEQSLTGERQGSPDSHIQQSCTSTDADLGPFQKRVVGDTTEL
PTPDALPAEDVSCPTKSTSAKRARAPLPPVKMTSTFREEGAGKQSSGKLQSPEAPTSSKL
SSGNWVKKQNGGVGVALPCVTLAQPPCFPSPAPSSIPHPEPLKGSGSRRDCPPQTTSSVP
GQKTLLHAGALPSITEQNSGEEAGGRGDRSASSTRRPHPVKPLSSLENQPASNIHEGQAG
KSTGILGGLQEKIKVKDTGVKGPYSQLTQEELISLVLKQQEQLSKRDDKIKELEQYIDNL
LVRIIEEQPSILMTMNSLK
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcggaccagagccaacagtggtatcccaccagcgtacaggtaactgtgctt
caggcaagaagcctgaggataaagggaaaaaatggcaccaacgacgcatacgccatcatg
caagtagccaaggataaattcgctacatcggtggcagaaaagagtgtggtaccggtgtgg
aaagaggaggccacgttcgagctgccgctcttccacaacggtaacacagagaagtgtacg
ttgcatgtccacgtaatgcaccgggctctcgtgggatcggacaagttgctcgggcacgca
gtcatcaacctgttggagctcagcgaggttaaatcccgcaataagactgaatggcataag
ctgttggataaggcaggcaagccagacaaagacaggggagaggtgctggtggacatccag
tttatgaagaacaacctgacagccagcatgttcgacctctctgctacagacaagccgcgc
tcccgcctgggcaagttcaaggacaaggttcgagggaagaagaaggagggtctgtcggac
tcagcgtctgccgtggtgccgtccttcacccaggttctgacggacagcgagggagagggg
gaaggggagggaggtgcagacaaagaagagaaaaagaagaaaaacaagctgaagtctctg
ttttcctccaagtctaatctgcagcgtcacggactgtctcaatccatgtctgtcctgggc
cctctgccggagaaggactcctcactgagtggcagcccctcaggcctcaacgaggactcc
tctgaaggtaaaaataaattcaagtttctgacccataagcgcacaggcagttccgacagt
aaggcttctcagggctccctgtctctagggcgctctaagatccatgccccgcttgcagag
cagagtaacctgtgcatcaacggcagccacttgtacacagaacatccccatccccggagc
gcacgcaccggctccaccttcagccttgccagctcaggccacggttccatggaagaccta
cgcagggcccagggccgtaagagctccagcacctccatggactctctcacggccctgaag
cagccctcaccctgggcagagggggagagcagcagggcagaggaggatgaggaggaggaa
gacagagttaagatggatgagatgaagagaaaggaagagcaagagagaaagaagttagag
gaagagaggatgaggaaggaggaacaagagaaaaggaggattgggaaggaggtagaaaga
cttaggtttgaggaggaagagaaaacaaggaaggaggagcaggaaaacagaaagaggatg
gaggaggaggaaaagattagggttgaggaggaaagtagaatgctggaagagaggaagagg
agactgaaggaggagggagaggagagggtaaagaagaaagaacaggaaatgattaggtta
caggaggaacaagagaggtgggaagaagaggaaaggatgaggcgagaagagcatgaaaga
atgaagagggaggatagactgaggaaggaggacgagaggaaaatgagggaggaggaaaga
ttgaagagggagaaagaggagaggattaaggaggaggaagaaaggattaggagagaacaa
gaggaagatatgcaaagaagggaggaacggcagaggaagatgagggaggaggaagaaaga
ctaaggatggaagaggagatgagggaggaagaagtaagagtgaagagagagcaggatagg
ctgagagaggaggagagaagagtgagggaggaggaagaaagagtgaggaaggccgaggag
gaagataggctgagagcggaaatggggataaagaggacagaggaggaggaaagaattaag
agggataggctgagaaaggaggaagaggagagtaagatcaggaagcaggaagagaggata
aggatattagaggaggagatgttgaggaaggatgaagagcagaggaagatcagggaggag
gaagagaggataaggagattagaggaggagatgttgagaaaggaggaagaggagaggacg
attagggaggaggaggagaggataaggagatttgaggaggagatgttgaggaaggatgaa
gaggagagggagatcagggaggaggaagagaggataaggagattagaggaagagaggata
aggagagtagaggaggagaggctgaggaaggatgaagaggagaggaagatcagggaggag
gaagagaggataaggagatttgaggaggagaggctgaggaaggaggaagaggagaggaag
atcagggaggaggaagagaggataaggagatttgaggaggagatgctgaggaaggaggaa
gaggagaggaagatcagggaggaggaagagaggataaggagatttgaggaggagatgttg
aggaaggaggaagcagaaacaatgaggcttgaagaagaaaggggcaatgaacaggagagg
agtgataaggagcagaaagaaagatttagggtagaggaagaaaatatgaaaacagaggag
ttgagacaggaagagaaaaggagaaatgcacagatggaggaagagcaaaggcgtgaggag
gcgagggcaccgttggaggaagttgagaagcagatggagcagtatagcgaggcaaaggtc
accgtgtgcaataatccttttgaggaagtctctcccaccagttcatttgatgacagctct
tcaaataatctgtttgaggagaaccctatgaccactactggacccatcagctgccggata
aataaagtatcagcagtcaagccaagaccctcttcatgggggaacccttcaaagcctgct
atatcttccaaccccttcttatcgtcctcgtctcctgaactggagagttctatggactcc
cccagaggcgcaagggaaaatagagatgctattgacccgtctgctaatctgatggagaag
aaagaccctgcccctgtggctcccatcaatcagccctgggctcgtaaggacaactggtct
agtaaatctcattgtgccacacctaccctcgctaaaacaaagccaacaaaaccgccccct
cccctcagatgtcaatcttccacggcattggtgggaagtggggatgaccaggggagtgtt
agtggtaaggaccattccagtgtcagacaggataagggccctgctccactgcctccagac
aaccagcgatgggctcataaggacaactggcccagtaagtccaaccctggttctgccact
cctaccctcacccaaaaaacgccaacaaaaccgcagcctcctccaagacgccactctgcc
acgtcattggtgggaagcgaacatgacctgcacttaaatgagagtgttagtcagggtgat
tccggtgtcaggggggacaagcgtcctgctccactgcctcctgacagaccaaaccaggct
ccaagccagatacagagggaccagagtatggccagtgtgaatcggggacataaggacaga
gtggatgcctccatgtccaaagtttctcaacgtgtggtacagatgatcacgccactgaga
tcttcctccacagctacaacagagcacatcagtggaggccagagctctacccaccatggg
aaccaagcagaggaacccatgccatcagccactggggggttggtggttgcaaaacacaat
aaaggtccagcaccctccaggccccagcaccttccagggaagacaatgccaactccaaca
gttgatgtgttagatgagcaatcaaatactgaggaacatgactcttcggttgagtttggt
ccaaataatccctttgcagaagactgcagaatggagaagtcctctggatgtggtgtagaa
cagagtctaactggtgagcgccaggggagcccggactctcacattcaacagagttgtacc
tccacagatgcagatctaggtccgtttcagaagcgtgtggttggggacacaactgagctt
ccaacgccagatgctctgccagccgaggatgtctcctgtcccaccaaaagcacatcagcg
aagcgggcccgtgctcccttgcctccagtgaagatgacatccacctttagagaggaggga
gctggtaaacagagttctggaaaactacaaagcccagaggctcccacttcgagtaagctt
tcctcaggtaactgggtaaaaaagcagaatggcggggtgggtgtggcactaccatgtgtt
acacttgcccagcccccatgtttcccatcacctgccccctcctccataccccaccccgag
cccctgaagggatcagggagcaggagagactgccctccccagacaacaagctctgtccct
ggccagaagaccctgcttcatgctggagctctgccctccattacagagcagaacagtgga
gaggaggcaggagggagaggggacaggtctgcctcaagcacacgcaggccacacccagta
aagcccttgagttccctggaaaaccagccagcttctaacatccatgagggacaggctggc
aaatctacagggatcctcggtggccttcaagagaagataaaggtcaaagacacaggggtc
aaaggtccctactcccagctgacccaggaagagctgatctccctggtgctaaagcagcag
gagcagctctccaaaagggacgataagattaaggagctggagcagtacattgacaacctg
ctggtgcgcatcatcgaggagcaacccagtatcctgatgaccatgaactcactcaaatga
DBGET
integrated database retrieval system
