Oncorhynchus keta (chum salmon): 118387715
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Entry
118387715 CDS
T09424
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118387715 (rfx3)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other basic domains
RF-X
118387715 (rfx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
Motif
Other DBs
NCBI-GeneID:
118387715
NCBI-ProteinID:
XP_052381766
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All DBs
Position
9:38155559..38277856
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AA seq
772 aa
AA seq
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MQTPEAGADSASTVPLQTAVPVQPAGSAQQVTSQVPVQQQTQTVQQVQHVYPAQVQYVEE
NSGVYTNGTIRTYSYSEPQVYSQNSGGSYFDTQGSSSEVSTVVSSHGMANNGGGNGGLTM
GLAGGQIISSSGAYLIGGNSMDNSAPHPATQTTRASPSTVSIEMAIETLQKTEGLSSQRS
SLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLR
TRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKVDGVSGE
NFSGGGQHTPSAAEQTVIAQSQHHQQYLDASRALPDFVELDLGETNVENIGPDDIKALQS
LYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSDLVEGTTITENSGMSEIEGRLPCSRL
VVLCRNEAVLKWMSSCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMN
VIPQRMIQTKVAAVSAFSQTMRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQ
EQASWVCQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQVLQPFEDRPSFPRAAR
QFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIGVMG
DFDDLNAMSPAYMDKDEVSEMDSDLEEDMEESGEPLAKREKAELQHEHQVIQVIQVGALE
DGCNPVVGVVQPGILHSLPQPPQDHAEHILTPSAATPTIRHCSATGNTYASV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaggcaggcgctgactccgcctccactgtccctcttcagaccgccgtg
cctgtgcagcccgcaggctccgcccagcaggtgacctctcaggtgcctgtccagcagcag
acccagactgttcaacaggttcagcatgtatacccagcacaggtgcagtatgtggaggag
aacagtggcgtctacaccaacggaaccatacggacgtactcgtactccgagccccaggtg
tacagccagaacagtggagggagctactttgacacgcagggcagctcgtctgaggtgtct
acagtggtgtcgtcccatggcatggccaacaatggaggggggaacgggggtctgaccatg
ggtctggccggggggcagatcatcagcagctctggagcctacctcatcgggggcaactct
atggacaactctgccccccacccagccactcagactacccgagcctccccgtccactgtg
agtattgaaatggcgattgagacgctccaaaagactgaaggtttatccagtcagagaagc
tcgctgctcaacagccatctgcaatggctactggataactatgagactgcggagggggtg
agtctgcctcgctccaccctctacaaccactacttgcgccactgccaggagcagaaattg
gacccggtcaacgccgcttccttcggcaagctcatccgctccatcttcatggggctacgc
acgcgacgcctcggcacaagagggaactcaaagtaccactactatggcatccggctgaag
ccggactctcctctcaacagactgcaggaggacatgcagtacatggccctcagacagcag
cctgtccaacagaaacagaggtttaagccggtgcagaaggttgatggggtgtctggggag
aacttctcaggcggtggccagcacactcccagtgcagcagagcagaccgtcattgcacag
agccagcaccaccagcagtacctggacgcatcccgggcgctgccagactttgtggagctg
gacctgggagagaccaacgtggagaacatcggcccagacgacatcaaagctctccagtca
ctatacagagagcactgtgaggccattctggatgtggtggtgaacctccagttcagtcta
atagagaagctgtggcagacattctggcgctattccccctctgatttagtggagggcacc
accatcacagaaaacagtggtatgagtgagattgagggccgtttgccctgctccaggctg
gtggtgctctgtaggaacgaggctgtgctcaagtggatgagttcctgtgaccacctgatg
taccaggccctagtggagatcctcatccctgatgtcctcagacccatccccagtgccttg
actcaagccatccgcaactttgccaaaagcctggaaggctggctcaacaatgccatgaac
gtcattccacagagaatgatccagacaaaggttgccgctgttagtgccttttctcagacg
atgcgtcgttacactagtctgaaccacctggcccaggcagcccgtgctgtgttgcagaac
acctcccagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacag
gagcaggcgtcgtgggtgtgtcagtgtgaggagggtgtggttcagaggttagagcaggac
ttcaaggccaccctgcagcagcagagctctctggagcagtgggctgcctggctggacaac
gtggtcacccaggtcctacagcccttcgaggacaggcccagcttccccagggctgcgcgt
cagttcctgctcaagtggtccttctacagctccatggtgattcgagacctgactttgcgc
agcgcggccagtttcggctcgttccacctgatccgcctgctctacgacgagtacatgttc
tacctggtggaacaccgcgtcgcccaggcaaccggcgagacgcccatcggtgtcatggga
gacttcgatgacctcaacgccatgtcgcctgcttacatggacaaagacgaggtgagtgag
atggacagtgacctagaggaggacatggaggagtctggggagccgctggccaagcgggag
aaggctgagttgcagcatgagcaccaggtgatccaggtgattcaggtgggggctctggag
gacggctgtaaccccgtggtgggggtggtgcagccgggtatcctgcactccctgccccag
cccccccaggaccacgctgagcacatcctcaccccttctgccgccacccccaccatccgc
cactgcagcgccaccggcaacacctacgcctccgtctga
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