Oncorhynchus keta (chum salmon): 118387730
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Entry
118387730 CDS
T09424
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118387730 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118387730 (myo5b)
04131 Membrane trafficking [BR:
oke04131
]
118387730 (myo5b)
03029 Mitochondrial biogenesis [BR:
oke03029
]
118387730 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118387730 (myo5b)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118387730 (myo5b)
mRNA cycle factors
P-body specific factors
118387730 (myo5b)
Membrane trafficking [BR:
oke04131
]
Others
Actin-binding proteins
Myosins
118387730 (myo5b)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118387730 (myo5b)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118387730 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
Ac76
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118387730
NCBI-ProteinID:
XP_035632291
LinkDB
All DBs
Position
9:38609544..38692549
Genome browser
AA seq
1841 aa
AA seq
DB search
MKRQVKEHSNIMKRQEGKIDHELYCKYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLE
DESPLEYRIGPKDNPLPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYC
GIVLVAINPYDQLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSG
ESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKY
IQIGFDRRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAE
DFIFTSQGENIFIEGVNDAEDFKKTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSE
RDGDSCHISRNDPHLTHFCRLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDA
LAKHIYAHMFDWIVEHVNKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQ
QQFNQHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQN
WCQKLYDRLSSSVHFQKPRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKAS
KFQLVADLFQDTNKDGSSSTSSSSKSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLL
METLNATTPHYVRCIKPNDEKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDF
FNRYRVLMKKSDMTVGDKKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADK
FRSACIKIQKTVRRWLQMVRYKKIRKSAITLQRFGRGYMARRYAEQLRLTRAAVICQKQY
RMVRERTAYLRVRQAVVTIQAFTRGMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVA
RNAAITIQCAYRRMRAKRELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKT
QNEQLVVAKASLGSEVNKLQKELETMRSRQGDGSQLTSMKDELEKLRAELQEAHAHRKKL
EEEHSNEKMRFEQRVEELERENSLLKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAE
LDEERQRYQNLLREFSRLEQRYDNLQEAKFQPGHRRNNSNQSSLESDSNYPSISTSEVGD
TDDAIQLVEEMGVEKAAMDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQSKHKGIEPKT
TSEQENADLAYNSLKRQELESENKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQ
LKAANEELDVRKEEVLILRSQIVTAAQQKEKDTTNHIETNNLPEWTNSKKPIDKEEALRS
YHGLCESKKLLEAQLQSQARKHEDELEAFRTQIELLRDDIEKKQEMLNHTMSLSPEAQVE
YSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEVSVTAAASQSTTAK
PEMTRQVTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPHTVSATVPCLPAYILFMCIR
HADYINDDQKVHSLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEAFM
TQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLVKVAEHVMQPMIVSAMLESESIPSL
AGVKPMGYRNRSSSMDKDEEGPGSYTLEALIRQLGQFHGVMGEHGLDPEIAGQVIRQLFY
SINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAVINMEPVIQAAQLL
QVKKKTSQDAEAICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDV
PMLLVDTKHTFPVLFPYTPSALSLETLHIPANLSLHFLTRV
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaagtgaaggaacatagcaacataatgaagagacaagaggggaagattgac
catgaactttactgcaagtacactcgggtgtggatcccagacccagaggatgtatggaga
gctgcagagatcatcaaggactacaaggaaggagagccaatcctgcacctcaaacttgaa
gatgaatcgccgttggaataccgcatcggacccaaagacaaccctcttcccttcctccgg
aaccctgatatcctggtgggggagaatgacctcacagcgctcagctaccttcacgagcct
gctgtcctgcacaacctcaaagtgcgcttccttgagcccaaccacatctacacatactgt
ggtatcgtactggtggccatcaacccctacgaccagcttcagatctatggagaggaggtc
atcaatgcctacagtgggcagaacatgggagacatggacccacacatctttgctgttgct
gaggaggcatacaagcagatggccagagatgagaggaaccaatccatcatagtaagtggg
gagtctggggcagggaagaccgtctctgctaagtacgccatgcggttcttcgccactgtg
ggagggtcggccaacgacaccaacgttgaggagaaggtgctggcctccagccccatcatg
gaggctattggaaatgcgaaaaccacacgcaatgacaacagcagtcgttttgggaagtac
atccagattggttttgacaggcgttatcacataataggtgccaacatgcgcacgtatctg
ctggagaagtcgagggtggtgttccaggctgaggatgagaggaattaccacatcttctac
cagttgtgtgcctctgctagcttcccggagttcaaagacctagccttgaccagtgcggaa
gacttcatcttcacatcgcaaggagagaacatcttcattgagggggtgaatgatgccgag
gacttcaagaagacgaaggaagcctttacactactgggtgttaaggagagcaatcaaagc
agcatcttcagaatcatagcttccattctgcatctggggaacgtggagatctgctcggag
agagacggagactcctgccacatatcaaggaacgaccctcacttgacgcacttttgccgg
ttgctgggggtggagctggagcagatggaacactggctatgtcacaggaagctggtcacc
acgtcagagacctacgtcaagaacatgtcccgcaaacaggcggctaatgcccgcgacgcg
ctagccaaacacatctacgcccacatgtttgactggatcgtggagcacgtcaacaagtcc
ctgcacacctcctccaaacaacactccttcatcggtgttctggacatctacggatttgag
acctttgagataaacagcttcgagcagttctgcatcaactacgccaatgagaaactgcag
cagcagttcaaccaacatgtgttcaagctggagcaggaggagtacatgaaggagcagatc
ccctggacgctcatcgacttctatgacaaccagccgtgtatcgacctcatcgaggccaag
ctgggcattctggacctgctggatgaggagtgcaaggtgcccaaagggacagatcagaac
tggtgccagaagctgtacgatcgcctttcaagcagtgtccatttccagaaaccacggatg
tccaacatatctttcattatcattcactttgctgataaggttgagtaccagtgtgatggc
ttcctggagaagaacagagacaccgtctacgaggaacacatcaacattctgaaggccagc
aagtttcagctcgtggcggatctgttccaggacactaataaagacggaagcagctccacg
tcttcttccagcaagtcctccaggatcaacgtgcgctcagccaaaccgacacctaaagtc
cccaacaaggaacacaggaaaaccgtgggccaccagttccgcagctccctgcagcttctc
atggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgag
aaggaggcattctcgtttgactccaggagagctgtgcagcaactgagggcatgtggagtc
ctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtacccagacttc
ttcaacagatacagagtcctcatgaagaagtcagatatgaccgtaggagacaagaaactg
gtgtgtaggaacctactagagaccctggtcaaggatccagacaagttccagtttggtaag
accaagatcttctttcgggcgggccaagtggcctacctggagaagctgagggcagacaag
ttccgctccgcctgcatcaagatccagaagacagtgcgacgctggctacagatggtccgc
tacaagaagatacgcaagtctgccatcaccttgcagagatttggccgcggttacatggcc
cgcaggtatgcggagcagctgcgtctaacccgcgctgctgttatctgtcagaagcagtat
cgtatggtccgagagcggacggcctatctgagggtgagacaggctgttgtcaccatccag
gcctttaccaggggcatgttcacccgcaggatcttccaggagttccttctgcatcacaaa
gccatgatcatccagaagcatgtccgaggctggctcaccaggaggaagttcaaggtggca
cggaacgccgccatcaccatccagtgtgcctaccgccgcatgcgagccaagcgggagctg
aaacagctgaagattgaggcgaggtccgctcaacatctgaagaagctcaacacgggcatg
gagaacaagatcgtccaactgcagaggaagatggatgaccagaccaaagatctgaagact
cagaatgagcaattggtggtggccaaagcctccctgggctcagaggtgaacaagctgcag
aaggagctggagaccatgcgcagtcgccagggagacggcagtcagctgacctctatgaag
gatgagctggagaagctgagggcggagctccaggaagcacacgcccacaggaagaagctg
gaggaggagcacagcaacgagaagatgagatttgaacagagggtggaggagttggagagg
gagaattccctgctgaagagtgaaaaggagaagatgaaccaaaggattctgcaccactcc
aagagcacagaagaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagag
ctggatgaggagaggcagcgctatcagaacctgctcagggagttctccagactggagcag
agatatgacaacctacaggaggccaagtttcagcctggccacaggaggaacaattctaac
cagagcagcctggagtctgactccaattatccctccatttctacctccgaggtcggagac
actgacgatgccatccaactcgtagaggagatgggagtggagaaggcagcaatggacatc
ggtgtgttcatgaagctgcagaagcgtgttagggagctggaacaggagaggaagagactg
caagtcaacctggaaaagatggaggaccagtctaagcacaagggcattgagccaaagacg
acatcagagcaagagaatgcggatctggcctacaacagtctcaagagacaggagctggaa
tctgagaacaagaagctgaagaatgacctgaacgagctgaggaaggccatcgctgaccgc
gcctccaagaacagctcctccaatgagcttcaggatggctacaacctgttgctgggtcag
ctcaaggcagccaatgaggagctggatgtgcgcaaggaggaggtccttatcctcaggagt
cagattgtcactgcagcccagcagaaagagaaggacacaaccaatcacattgaaaccaat
aacttgcctgaatggaccaacagcaagaagcccatagacaaggaagaggctctgaggtcc
tatcatggactctgtgagtctaagaagctgttggaggcccagctccagtctcaggccagg
aagcacgaggatgagctggaggcgttccgcacccagattgagctgctaagggacgacata
gagaagaagcaggagatgctaaaccacaccatgtctctgtcccctgaggcccaggtggag
tacagtgtccagcaggagatcacccgcctcaccaacgacaacctggacttaaaagagctt
gtggagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatgaag
aaagtacaggagctggaagtgtccgtgactgcagcagcatcccagtccaccacggccaaa
ccagagatgacccgtcaggtgactgtccagcgcagagagaaggactttgagggcatgctg
gagtactacaaagaggacgaggccctgctggtcaaaacgctcatcaccgacatgaagccc
cacactgtatcagcaacagtgccctgcctacctgcctacatcctcttcatgtgcatccgc
catgcggactacatcaacgatgaccagaaggtccactctctgctcacctccaccatcaac
gccattaagaaggtcctcaagaaaaacaacgatgactttgagatgacctccttctggctg
gccaacacgagccgtctgctgcactgtctcaagcagtacagtggagatgaggcgtttatg
actcagaacacggccaagcagaatgagcactgtctgaagaactttgacctggcagagtac
cgccaggtgctgagtgacctctccatccagatctaccagcagctcgtcaaggtggcagag
catgtgatgcagcccatgatcgtgtcggccatgttggagagtgagtctatccccagcctt
gcgggagtgaagcccatgggttacaggaaccgctcctccagcatggacaaggatgaggag
ggcccagggagctacaccctggaggccctgatcagacagctgggccagttccacggggtg
atgggcgagcacggcctggacccagagatagcaggccaggtgatccggcagctgttctac
agcatcaacgctgtcaccctcaacaacctgctgctcaggaaagacgtctgctcctggagc
actggcatgcagctgcggtacaacatcagtcagatggaggagtggcttcgggggaagaac
ctccaccagagcggggcggtgattaacatggagcccgtcatccaggccgcccagcttctt
caggtcaagaagaagacgtcccaggacgccgaggccatctgctcactgtgtaccgctctc
accatgcaacagattgtgaaaatcctcaacctctacaccccgctcaacgagtttgaggaa
agagtcactgtgtccttcatcagaaacatccagaatcgtctgcaggagaggaacgatgtc
ccaatgctcctagtggacaccaagcacaccttccctgtcctgttcccctataccccctca
gcccttagcctggagacccttcacatccctgccaacctcagcctacacttcctcactcga
gtctga
DBGET
integrated database retrieval system
