Oncorhynchus keta (chum salmon): 118387785
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Entry
118387785 CDS
T09424
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118387785
Cilium and associated proteins [BR:
oke03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118387785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_11
TPR_NPHP3
TPR_14
TPR_9
PUB
Motif
Other DBs
NCBI-GeneID:
118387785
NCBI-ProteinID:
XP_035632384
LinkDB
All DBs
Position
9:complement(40253910..40344389)
Genome browser
AA seq
2591 aa
AA seq
DB search
MEKHRPKKERFSLFGPRSSTRATNPPSSSSSSSTSARPIPPPLCQTDPHPCIPPGPTILS
KAEFLEAVRRSNQACQRGQYSLAVQLYGEALSADPQNCILYSNRSAALLHLGQYQTALDD
ALKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSP
LRDSLEPTYHQLQRMKLDKSPFVVVCVIGQELLTAGYHGASVVVLEAGLKIGTCSLKLRG
SVFSALSSAYWSLGNAEKSTGYMQQDLEVAKTLGDQSGECRAHGNLGSAYFSKVNYREAL
TNHRHQLVLAMKLKDREAASAALSSLGHVYTAIADYPNALASHKQCVLLARQTQCPLSEA
RQLGNMGAVYTALGDFTNAMQCHQQHLDIAKTLGNGPEEARAYSNLGSAHHSQRDFDKAV
SYHTLVLQLAQELEDRTIQMRAYAGLGHAARCMQDLERAGQYHQQQLDIADELQDRAAQG
RASSNLGIIHQMKGEYDAALKLHKAHLCLVQELGDYAAQGRAYGNMGNAYNALRMYDQAV
RYHRQELHISLEVNDRPSQASTHGNLAVAYQALGAHDQALQHYLHHLTIARELRDTQSTA
RALGNLGNFHCCRGEYAPAVPYYQQYLTLSPQLQDLEGEGKVCHNLAYTHYCLGQYREAV
RYYEQDLALAKDLGDKLSQAKAYCNLGLAYKALGEYSKAEDCQRYLLSLAQALNNSQAVF
RALGNLGDVCVCRGDVAGAVRFYQQQLTLAQEVKEHKMEADAYSALGSAHRLLRQYDLAL
SFHQQELSARTALDDQRGQCGALGRLAAVHMALTDYPTAFQCYQAQLTLTQGLRDACVEA
QVQGNMGIAKMNMGVLEEAIGYFEQQLAMLEQLSGAECVLDRGRAYGNLADCYDSLGDFE
EAIKYCEMFLTVAQSLNHVQDQERAYRGLGNAHRSLGSLQQALVCFEKRLVVAHELGGSG
GGEGGSRGRKAQAQAYGELGDLHSQLGNYEQALSCLEHQLNIASTAGDRALEGEASGALG
GVYQLMGENETALQWHQRALEIAEETGSVRSQGRAYGNLGLTYEELGNYERAVACQEQHL
SVAAQNNDLTAKTLAYGSLGRTHHALQNYTQAVMYLQEGLRLAEQCGRREEEARIRHRLG
LSLWASSNLEEAQNQLYRASALFESIRHEGQLSSDYRLTLFDLQTSSYQALQRILVSLGH
YDEALAVAERGRTRAFADLLVERQQGHQPLTSDPYTLTPDAYSPVTVEHILNTVNSQKSL
VLYFSLAAGYLYSWLLAPGTGIVKFHEVYLGEGGAELQASEIQRGGVSGCQTLEQHITAA
REALGVDDYYSSGETESEAGDLLEQQFEERLSSASDPTGYLRMVSRNNLFNRDSRSSSCL
VSSTVSPVSETPSLPCRPPPSPLGKPPLRALHHLLIAPMEGVLMPSSGAVGRHRQLVLVL
EGELYLVPFALLKGSSSNEYLYERFNLLAVPSLESLGPVAKSYPRRGAPFLYNGGGSMTA
VVGAPRLPSRVMERWLWGPLPSAHDEALRLGELLGCQPLTGTQATKDRVIAAMGQAECVH
FATHVSWKLAALVLSPSQDPGMDSGTRPKESAPCGGSLSSETGDVGARTEQREDGSEDGG
SVCDAESVCDSPPLQEFLLTAADILDLRLPIKLVVLGSYQECVSRVTADGVVGLTRAFLA
AGVQCVCVSLWPVPMAASKVFTHTFYTALLNGTKASAALTEAMKTLQSSTHFSHPSNWAG
FMLIGCDVKLNSPSSLIGQALAEILQYPERARDSLRVLLHLVEKSLQRIQNGQSNAMYTL
QQSVENKVGGVPGWQALLSAVGFRLDCPGTGSGLPAAVFFPMADPGDRLQLCSTTLQSLL
GLPHSAFQALSKLVIAAETGEQLINKLHQVLVQQQTCDKEQEFSLAPIQVSISVQLWRLP
GCHEFLAALGFDLCEAGQEEVLLKTGKQACRRTMHFALQSLLALFDSTELPRRLSLDSSS
SLESLSSSQCASVPLNLPQPPFSPPLGGPDSLSCDAISLYSLSSLASSLSFLSRPEPAGS
DGISQRSRQQELERHRGGVSHRHTGDVSRNRLTNHRGVGRGTEGEDKYEGFSIISSEPLG
GGGRECDTLPFPGGHRHIRGAGRGGAAGRGYPVSISSKGSVSTPTSPLKVLPPPLAIPPS
PTTHVKSQGSQSLSEGQVVSTEAVLSESDQSSTETDSTVKSQEDKPPFTPLDPQELATRI
LEETQSHMQALESLQRGRTGRAGNGGGEKGLRGQECTPSSTLVPLTPTGGGLGFRSSESS
AFSRPSSRASLQARASPLSLSSPLSPLPATLSPISTPLLSTRPKPPSRCSSLQKISSGYN
SPALSSLSSSLSFSHPHPSPSRTPDPHIHAQLRLKYPSSPYTPHISHSPNSISISPSSGH
PSPAGSLLSLAASPALSLAPSPALSLAPSPALSYSSTGSTASRSSLAETPGLRRLKQAGL
VDERVQAIHNLKTFWSNATQRQEVPGPGRVLRDGGKKMSTVQKDVLGLLHLSPRHGSNNK
NQDAEGPQSPINPLNGHRMLGSKPPVAPPPQTATDSSRGGSPGAPPHPVRLPSGNGFKFP
SPGKFFPSSKC
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacatcgaccgaagaaagaaaggttctcactcttcggccctcgctcttctacc
cgcgccaccaaccctccttcttcctcctcttcgtcctctacctctgctcgccccatccct
ccccctctctgccagacagaccctcatccttgcatccctcccgggccaacaatcctttct
aaggcagagtttctggaggcagtacgtcgcagtaaccaggcatgccaacgggggcagtac
agcctggcagtgcagctctacggggaggccctgtctgctgaccctcagaactgcatcctg
tacagtaaccgctctgcggcccttctccacctgggacagtaccagaccgccctggacgac
gccctcaaagcccgcctgcttaaccccaaatggcccaaggcatacttccgtcagggtgtg
gccctgcagtaccttggtcgccatgccgacgccctggcagcgtttgcctctggtctagcg
caggaccccaagagtctccaactactggtgggcatggttgaggctgccatgaagtcccca
ctacgagactctctagaacccacctaccatcagctgcagaggatgaagctggacaagagt
ccattcgtggtggtgtgtgtgattggtcaggagctgctgaccgctggttaccacggcgcc
tcagtggtggtcctggaggcggggctaaagatcggcacatgctctctgaagctccgaggt
tcagtgttctctgctcttagctcagcctactggtcgctaggcaacgcagagaagagcaca
ggatacatgcagcaagacctggaggtggccaagacgctaggtgaccaatcaggcgagtgc
cgagctcacgggaacctaggctctgcctacttctccaaggtcaactacagggaggctttg
accaatcacagacatcagctggtcctcgccatgaaactcaaggacagagaggctgcgtcc
gctgcgctgagcagccttggccatgtgtacacagcgatcgcggactatcccaacgccctg
gccagccataagcagtgtgtgctgttggcacggcagacccagtgcccgctgtcagaggct
cgccagctgggcaatatgggcgctgtctacaccgcactgggagacttcaccaacgctatg
cagtgtcaccagcaacacctggatatagctaagactctgggtaatggtcctgaggaggcg
cgggcgtacagtaacctgggcagtgcccaccacagccagagagactttgacaaggctgtg
tcctaccacaccctggtgctgcagctggctcaggagctggaggacaggactatacagatg
agggcttacgccggcctgggacatgctgctcgctgcatgcaggacttggagagggcaggc
cagtaccaccagcagcagctggacatagcggatgagctgcaggacagagctgcacaggga
cgagcttcatccaacctgggtataatccatcagatgaagggggagtacgatgcagcgttg
aagctccacaaggcacacctgtgtttggtccaggagctgggggactacgctgctcagggc
agggcctatgggaacatgggaaatgcctacaacgctctgaggatgtatgaccaagctgta
cgctaccaccggcaggaactgcacatatcactcgaggtgaatgaccgtccctcccaggcc
tctacccatggtaacctggctgtagcttatcaggcgctgggcgctcacgaccaggctctc
cagcactacctgcaccacctgaccatcgcacgcgagctacgagacacgcagagcacggcc
agggcactaggtaacctgggtaacttccactgctgtcgaggggagtatgccccggcggtt
ccgtactaccagcagtacctgaccctgtcacctcagctacaggacctggagggagagggc
aaggtatgccacaacctggcctacacacactactgcttgggacagtacagggaggccgtc
aggtattatgagcaggacctggccctggctaaagacctgggtgataagttgtcccaggct
aaagcctactgtaacctgggtctggcctacaaagccctaggggaatatagcaaggctgag
gactgtcagagatacctgctgtccctggctcaggctctgaacaacagtcaggcagtgttc
cgtgccctgggaaacctgggggatgtgtgtgtgtgtcggggtgacgtggccggggcggtg
aggttctaccagcagcagctcaccctggctcaggaggtcaaagaacacaagatggaggct
gacgcctactcagcgctaggctctgcccacagactcctccgtcagtacgacctggccttg
tccttccaccagcaggagctgtctgcccgcactgctctagacgaccagcgggggcagtgt
ggtgctctgggccgcctggcagccgtccacatggccctgacagactaccccacagccttc
cagtgttaccaggcccagctcaccctgacacagggcctcagagatgcctgcgtggaggca
caggtccagggcaacatgggcatcgctaagatgaacatgggcgtcctggaggaggccatt
gggtattttgagcagcagttggccatgctggagcagctgagtggggctgagtgtgtgctg
gatagaggcagggcctacgggaatctagcagactgttatgactctctgggagactttgag
gaagctataaagtactgtgagatgtttctgactgtggctcagagtctcaaccatgttcag
gaccaggagagagcctacaggggactgggtaacgcacacagatctctaggtagtctccag
caggcgttggtgtgttttgagaagcgtctggtggtggcccatgagctgggcggatcggga
ggtggagagggaggaagtagaggaaggaaggcccaggcccaggcatatggggagctcgga
gacctacacagccagctggggaattatgaacaagccctatcctgcctggagcatcaactc
aacatcgcctccaccgcaggggaccgggcactagagggcgaagcgagcggggcgttgggt
ggagtgtaccagctgatgggagagaatgagacagctctacagtggcaccagagggcatta
gagattgcggaggaaacaggaagtgtgaggagtcaggggagggcctacgggaacctggga
ttgacctatgaggagctgggaaactacgaaagggctgtggcctgtcaggagcagcactta
agtgtggcagcgcagaataatgacctcacagccaagacactggcgtacggcagcctgggg
aggacacaccatgcgctacagaactacacacaggctgtcatgtacctgcaggaaggtctg
cgtttagcagagcagtgtgggaggagagaggaggaggctaggatccgtcatcgtctgggc
ctgtcactgtgggccagcagcaacctggaggaggcccagaaccagctgtaccgagcttct
gccttgtttgagtcgattcggcatgaaggccaactcagctcagactacaggctgactctg
tttgacctgcagacatcatcataccaggctctccagaggatcctcgtcagcctgggtcat
tatgacgaggccctagccgtggcagagcggggtcggacccgggcgttcgccgacctcctg
gtggagcgacagcagggtcaccaacccctgacctctgacccttataccctgacccctgac
gcttactccccggtaaccgtagaacacatcctgaatacggtcaacagtcaaaagtcactg
gtgctgtacttctctctggccgcagggtacctctacagctggctactggcaccaggcaca
ggtatagtgaagttccatgaggtgtacctgggtgagggaggagccgagctgcaggcttca
gagatccagcggggaggagttagtggctgccagactctggagcagcacatcactgcagct
agagaggctctgggagttgacgactactacagcagcggtgagacagagagcgaagcgggt
gatctgttggaacagcagtttgaggaacggctgagctcagccagcgacccgacaggctac
ctacgcatggtttccagaaacaacctcttcaacagggatagtaggagttcttcctgtctg
gtcagttctacggtgtctccagtgagcgagaccccctctctaccctgtagacccccaccc
agccccctcggcaaaccccccctacgagcacttcaccacctgctcattgcacctatggag
ggggtgctgatgcccagtagtggtgcagtgggcagacatagacagctggtgttggtgtta
gagggagagctgtacctggttcccttcgctctgctcaaaggtagctcttctaatgagtac
ctgtatgagaggttcaaccttctagctgtcccatctttagagagcctggggcctgtagct
aagtcctaccctcgtcgtggggctcccttcctctacaacggtgggggttccatgactgca
gtagtaggggctccacgcctgccctccagggtgatggagcgttggctgtggggtccgctg
ccctcagcccacgacgaggccctccgcctgggggaactgctgggctgccagcccctcact
ggaacacaggccaccaaggaccgtgtgatagcagccatgggccaggcagagtgtgttcac
tttgctactcatgtctcctggaagctggcggccctggttctctcccccagccaggatcca
gggatggactcgggaacacggcccaaggagagtgcaccgtgtgggggatcgctttcaagc
gagactggggatgtgggagcaaggactgagcaacgggaggacgggagcgaggacggagga
agtgtgtgtgatgcagagagtgtgtgtgacagtccaccacttcaggagtttctgctcact
gcggcagacatactggacctgagactgcctatcaaactggtggtgctggggtcgtaccag
gagtgtgttagcagggtgacagctgacggggtggtgggtctgacccgtgccttccttgca
gcgggggtgcagtgtgtgtgtgtgtcactgtggcccgttcccatggcagcctccaaggtg
ttcacacacaccttctacacggcgctgctgaatgggaccaaggccagtgcagctctcact
gaggccatgaagactctacagagcagcacacacttctcacacccttctaactgggcgggc
ttcatgctgattggctgtgatgtgaagctgaacagcccctcgtctctgattggacaggct
ctggcagagatcctccaataccctgagagggctagagactccctgagagtacttttgcac
ctggttgagaagtctctccagcgtatacagaatggtcagagtaatgctatgtacaccttg
cagcagagtgtggagaacaaggttggtggcgtaccgggatggcaggccctgctgtcagcc
gtggggttccggttagattgtcccggtaccggcagtggtctccccgctgctgtcttcttc
cctatggccgaccctggagaccggctgcagctctgcagcaccactctgcagtcactacta
ggtctgcctcattcagcattccaggccctctctaaactggtcattgctgctgagactgga
gaacagctaatcaacaagctccaccaggtattggttcagcaacagacatgtgacaaggag
caggagttctcattggctcccatccaggtatccattagtgtccagctgtggagacttcct
ggttgtcatgagttcctggctgcgctgggttttgacctgtgtgaggcaggacaggaggag
gtgctattgaagactggtaaacaggcttgcagacggacaatgcactttgctctgcagtct
ctactggcactgtttgactccacagagctccccagacgcctcagcctggacagctcttca
tctctagagtctctctcctcctcccagtgtgcctccgtcccccttaacctcccccagcct
cccttctcgcccccgcttggtggcccagacagtctctcatgcgacgccatctccctctac
agcctcagctccctcgcctcctctctcagcttcctgtcccgccctgaacccgcaggaagt
gatggcatcagccagcgttcgcggcagcaggaactggagcggcaccgcggaggagtctct
caccgacatacaggagatgtgtcgagaaacagattaacgaatcacagaggagtaggcaga
gggacagagggggaggataagtatgaaggattctctatcatcagcagtgagcctctggga
ggaggggggagggagtgtgacaccttacccttccctgggggacacagacacattagagga
gcagggaggggaggggcggcagggagggggtaccccgtctcgatctcctccaaggggagt
gtcagcactcccacctcaccgctcaaagtcctccccccgcccctggccataccccccagc
cctaccacacacgttaagtcccagggctctcagagcttgtctgaaggtcaggtggtcagt
acagaggcagtcctctcggagtctgaccagtccagtacagagacagacagcaccgtcaag
tcccaggaagacaagccacccttcacccctctggacccccaggagctggccaccaggatc
ctggaagagacccagagccacatgcaggctttggagagcctccagagggggaggacagga
agggcaggcaatgggggaggggagaaggggctaagaggacaagaatgtacaccctcctcc
accttagtccccctgacccccactggaggtggtttgggcttccgttcgtctgaatccagc
gctttcagcagacccagtagtagagccagcctacaggcccgggcttcacctctctccctc
tccagccctctctcacccctccctgccactctctcacccatctccacccctctcctctcc
accaggcccaaacccccctctcgttgctcgtccttacagaagatcagctccggctacaac
agcccggccctatcctccctctcttcctccctctctttctctcacccccacccctcacca
tccagaaccccagacccccacatccatgcacagctcagacttaaataccccagctctcct
tacaccccgcacatctcacactcccccaatagcatctccatctcccccagctcaggccac
ccttctccagccggcagcctcctgtccctggccgcctccccagccctctccctggccccc
tccccagccctctccctggccccctcccctgccctctcctactcctctacaggctctacc
gcgtcccgctccagcctggctgaaacccctggcctgcgccggttgaaacaggcaggcctg
gtggacgagagggtccaggccatccacaacctgaaaaccttctggtccaatgccacccag
aggcaggaggttcccggcccaggcagagtgctccgagatggggggaagaagatgagcacg
gtccagaaagatgtcctggggcttctccacctctctccaagacatgggtccaacaacaag
aaccaggacgctgaggggccccagagccccatcaacccgcttaacggacatcgaatgctg
ggttcaaaaccaccagtggcgcctcctcctcagactgctactgactcctccaggggaggt
agtcctggagcacccccacaccctgtcagactgccctctgggaatggcttcaagttcccc
tcgcctgggaagttcttcccctcctctaaatgctga
DBGET
integrated database retrieval system
