Oncorhynchus keta (chum salmon): 118387822
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Entry
118387822 CDS
T09424
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118387822
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118387822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
118387822
NCBI-ProteinID:
XP_035632470
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGMEAMAPPTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHSAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTTELNNGIKKEASSKDVARIWVNDDMKVRSFSPTLKLPGMEEEAEEEEDEELGHA
ETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEETVDRGWLSALQLEAIT
YAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDA
ERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVVFATYSSLIGESQSGGKYKTRFK
QLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGA
SEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFT
GVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQRMKKSMWGQFWSAHQR
FFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKG
VLQSLIEKHFPAPDRQKLFSLLGIDLSVKKTPSPSEAAAEQKGKKRKAGAEIKKPEKRKR
KSGGLSGSSSDDSESEESDKDDAESDDSFKSVSSGEDDDDFNPFKDDSSEDEEDDPWLSG
KRKEAKKGKEKMNKKKKKKKKSIDPDSIHSALLASGLGSIRPAFTTPIVKTSSTPAIAKV
EADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDELGGPDNVAEMTGRKG
RVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVK
NQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLES
LGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNPPSDFEGDFYKEI
RHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQYFSDTLAAVIQN
AKKNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVELYTVSVERGMSWEDATHAW
AEQSGPDDGFYVQVRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLKLEAYADIKKKCKKV
LSDDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRTYYVLCGSVLSVWTK
VEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILSSSDQSQQLAVQQQQ
KWQQLHPQSLSHVHNT
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccaggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctgggtgttggctcagggatggaggcaatggctccacccacacct
gcagtctcaatcaggcacaagcctcagccctcaactaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacggcc
agacacaccatcacagtcactaaggtggtccattcagctccctcagccctgcggggatcc
tcttccacacttacctactccactgctctcccctccccagtctccacagtggttccttcc
aacagagagcagatccagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccgccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccacggaactgaacaacgggataaagaaggaggcgtcaagtaaa
gatgtcgctcggatctgggtgaacgacgacatgaaagtgcggagcttctcacctacacta
aaactcccaggaatggaggaggaggctgaggaagaggaggatgaagagttgggtcatgct
gagacatatgctgagtacatgcctatgaaattgaggatcgggctgcgtcacccagaccca
gtggtggagaccagctccctgtccagtgtgaagcctccaaacgtttggtacagaatgtcc
ataccagaggagactgtcgaccgcggctggctgtctgctctgcagctggaggccatcaca
tacgctgcccagcaacatgagacattcctccctaatggcgacagagcgtcctatctgata
ggagacggggccggagtaggcaagggccggaccatcgctgggatcatctacgagaactac
ctcctcggtagaaagaggtcactctggttcagtgtttctaatgacctcaagtatgatgcg
gagagggatctgaaagacataggagccaagaacattcaggtccattcactaaacaagttt
aagtatggtaagatctcgtccaaacacaatggcagtgtgaagaagggggtggtcttcgct
acgtactcctctctgatcggagagagccagtctggagggaagtacaagacccgcttcaaa
cagctgctccactggtgtggagaggactttgacggagtcattgtatatgacgagtgtcac
aaagccaaaaatgtctgtcccatcgggtcatccaaacccaccaagactggactggcagtc
ctggagctgcagaacaaactgcccaaggcacgggtggtgtacgctagtgccactggtgcg
tctgagccccgtaacatggcctacatgaaccggctgggaatctggggagaggggacacct
ttcagagagttcagcaactttatccaggctgtagagcgcagaggtgttggtgccatggag
atagttgccatggatatgaagctgagggggatgtacattgccaggcagctgagtttcaca
ggtgtcacgttcaagattgaagaggttcccttgacaacccactacatcaagatgtacaac
aagtctgtacgcctgtgggtggctgcgcgggagaagttccaggcggctgctaacctgatg
gaggcagagcagcggatgaagaagtccatgtggggtcagttctggtcggcccaccagagg
ttcttcaagtacctctgcattgcctccaaggtccgcagggtggtgcagcttgccagggag
gaggtcaaaaacggaaagtgtgtcgtgattggtcttcagtcgacaggagaggccagaaca
ctggaggccctggaggaaggaggaggagagctgaacgactttgtttccaccgcaaaaggt
gttctgcagtccttgatagagaagcactttcctgctccagacagacaaaagctgttcagt
ctgctgggcatcgacctgtcggtcaagaagacgccatcgcccagcgaggccgccgcagag
caaaagggcaagaagaggaaagcaggtgctgagataaagaaaccagagaagcggaagaga
aagtctggtggtctgtcagggagcagctctgacgacagcgaatcggaggagtctgataag
gatgatgcggagagtgacgacagcttcaagtcggtcagctcaggagaagatgatgatgac
ttcaaccccttcaaggatgattccagcgaggatgaggaggatgacccctggctgtctgga
aagaggaaagaggcgaagaaaggcaaggagaagatgaataaaaagaagaaaaagaagaag
aagagcattgacccagactctatccacagtgccttgttagcctctggtctgggctccatc
aggcctgcttttaccacccccatagtcaagacctccagcacacctgccatagccaaggta
gaggcagatgacagctgtatgaccagtcaggatgctgtggaagatgctcagcagatgaag
agagatctgttggaccagctggagaagctggctcaggatctaccccccaacactctggat
gaactcatagacgagctgggaggaccggacaatgtggcggagatgacaggccgtaaaggt
cgggtggtcagtaacgacgacggcagcatctcttacgagtcccgctctgaattggatgtt
cctgtggagatcctcaacctcacagagaaacagaggttcatggacggagagaaaaacata
gccatcatctcggaggcggctagctccggtatctccctgcaggctgaccggcgggtgaag
aaccagaggaggagggtccacatgaccctggagctgccctggagtgcagacagagccata
cagcagtttgggaggacccacaggtctaaccaggtgacagctccagagtatgtgttcctc
atctctgagctggctggggaacagaggtttgcctccattgtggccaagagactggagagc
ctgggtgccctcacgcatggagacagaagagcaacagagacaagagatctcagcaggttc
aactttgacaacaaatatggcagaaatgcactggagatcgtgatgaagtctattgtcaac
ctggactctccgttagtgaatcctccttcggacttcgaaggggatttctacaaagagatc
cgtcatgggttgatcggagtgggtctgatcaatgtggaggaccgatcagggattctgtct
ctggacaaagactacaacaacatagggaagttcctgaaccgtatcctagggatggcagtg
caggagcagaacgctctgttccagtacttctctgacactctggcagctgtcatacagaac
gccaagaagaacggacgctacgacatgggcatcctggacctgggttctggggatgagaag
gtgaagaagattgaagccaagaagttcctgactccaggctactccacctcaggacatgta
gagctctacactgtgagtgtggagagaggcatgtcctgggaggatgctacccatgcctgg
gccgagcagagtggaccagatgatggcttctatgtacaggtaaggaacaacaagaagacg
gccatcttggtgcaggaggtgaacagtaagaagaggctgttcctggtctatagacctaat
acgggaaaacagcttaaactggaagcctacgctgacatcaagaagaagtgtaaaaaggtg
ctctcagatgatgccaaacagcactggattgaccagtacaagtcttcagctgagatctgc
gctcatgcatactggcgtggtaactgtaagaaggcgtcagtgggtctgcagtgtgaggtg
ggtctgcgctgcaggacgtactatgtgctgtgtggctctgtgctcagcgtgtggaccaag
gtggagggggtcctggcctccgtcagcggaactaatgtcaagatgcaaatcgtccgcctc
agaacagaggacgggcagaggattgtgggcctgatcattccagcgaactgcgtctctcct
ctgaccaacatcctgtcgtcatctgaccagtctcagcaactggctgttcagcagcagcag
aagtggcagcagctgcaccctcagagcctcagccacgtacacaacacatag
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