Oncorhynchus keta (chum salmon): 118387837
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Entry
118387837 CDS
T09424
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118387837 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387837 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oke02044
]
118387837 (sec31a)
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118387837 (sec31a)
Secretion system [BR:
oke02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
118387837 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_HPS5
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Prp18
SAP_new25
Motif
Other DBs
NCBI-GeneID:
118387837
NCBI-ProteinID:
XP_052381826
LinkDB
All DBs
Position
9:complement(40831129..40859303)
Genome browser
AA seq
1597 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHGDVVIAQSNK
HSGPVRALDVNSFQDNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQAFSQTQADTISTSFGNMDPFG
MGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQP
TAHVVHISQVITETTFLERSAQLQATLAAGSFVDFCQEKMDSAQNEFEKTVWSFLKVNFE
NDARGKYLELLGYKKEELAAKIAAALEGEPIQPEEPSTALAPTSVPEPEADPGPEPEVVP
FPAPQLNTEPEVLPPVPEAATVEPNPEPPLEPALQPEPGPQPELAPPPSCDLSASDPMPV
LQSEPVLTLDLSAEPQLLAPVALLPESDPTLAPPALAPPADLQQAPMFDLTAPFTLQPPT
EFNQVNSLPVSEFDQVDLQAVPGFDPTSTMSSLQSAVQLDLAPPVSTLQPLADPGLPPED
AFDLIAATNLQPAAEVELTPAPEPETEDPFDLIAASNLQPAAEVELTPAPEPETEDPFDL
IAATNLQPAAEVALTPAPEPETEDPFDLIASANLQPAAEVELTPAPEPETEDPFDLIAAA
NLQPVAEVTGHLEPLAAEVDLTEALGAEPIAQEEMPVNEEIPLEEEAAPPAEAEASLPGE
APVPEGIKLRVSQGVDGLITQALLTGDFQGAVELCLHDNRMADSIILAIAGGAELLEKTQ
RKYFTKTHSKITKLISAVVMRDWRDMLQTCELQNWKEALAAVMTYAQPEEFSSLCDLLGC
RLEAVEDCTLQAQACLCYICAGNVEKLVTCWTRAQDRHCPLSLQDLVEKVVVLRKAVEQN
QESDPSAVGLLLGEKMSQYASLLASQGSLTNAIAYLPQNTEQVAVQQLRDRLSRALGQQA
PAAAPVAQLPSPQPTAAQPRQLFTPAQPSMVSQQPAPAPVPAAATAPQQYYQPVRSASTV
TSWSNQTPTALPSVPPPHLGPATTEPQVQPTPPMYGMPPSGSAAPPASSSAAYPPMYSHQ
YQPYPPASQYNHGTGGPAIYSPLQYSAPPPPSFSSSSPQAPAPGFMPQYTQQPLYPPPSM
GQPVSSAPPFSPPPLSSGASFQHGGPGSPASYIPPLPPTGSSEGYNPDTTCFMEGEGPQN
GWNDPPTLSRVPKKKKVPENYTPPSPIMAPIFSPLGAGDPQQPPYMPPGQAQNQAPYQGM
QQQMAPPPMNPGMLKTRGGSVEGAPGAPTGDTIQPLQSIPAEKITMKPIPDEHLVLKNTF
EGLIHKCLAAATDPQTKRKLDDANKRLVALYDKLREQTLSPAILGGLHNMVQCIESRSYV
ESLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagagatcaaccgcacggccatccagagctggagcccagcacagcaccac
cctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctccttcagtacctcc
gcctctctggagatctttgagctggacctggccgagccttctctggacatgaagctccgt
ggagcttactcctcctctcacagataccacaagctggcgtggggtccccacggcatggat
gcacagggtctcccgtctggagtgctcatcgcagggggagagaacggcgacgtcatcctt
tacgacccggccaagatcattgctggacacggtgacgttgtcatcgctcagagtaacaaa
cacagcgggccagttagagcccttgatgtcaactccttccaggacaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctaaacaactttggctccccgatgaca
ccaggccctaaaactcagcctctagaggacatcagctgtgtggcgtggaacaggcaggtc
caacacatcctggcctcagccagccccagcggccgcgcctccatctgggacctccgcaag
aacgacctaatcatcaaagtcagcgaccacagcaacaggatgcactgctctgggctagaa
tggaaccccgaggtagctactcagctggtgctggcctcggaggatgacaggatgccagtg
atccagatctgggacctgcgttttgccacctcccctctcaaagtcctggagaaccacaca
cggggtgtcctggccattgcctggagcctggcggaccctgagctgctactgagctgcggg
aaagacaaccgaatcctctgctggaaccccaacaccgccgaggtgctgtatgagctgcct
accagtacccagtggtgctttgacatccagtggtgtcccaggaacccggcggtgctgtcg
gccgcagccttcgacggacacatcagcatctactccatcatggggggcagcagccaggct
ttcagccagacacaggcagacacgatcagcacgtcatttggcaatatggatccatttggg
atgggtcagaccctgccccccctgcagctttcccaggccccgcccgcctccaccaccatc
acccccctcaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggcaagctggtgtcgttggagaacatcaagcccaacccccaacagcctcagcagccc
acggctcatgtggttcacattagtcaggtgattacggagacgaccttcctggagcgctct
gcccagctgcaggccacactggctgctggcagcttcgttgacttctgccaggagaagatg
gactcggcccagaacgagtttgagaagaccgtctggtccttcctgaaggtgaactttgag
aatgatgctcgtggaaaatacctggagcttttgggatataagaaagaggagctagcagca
aagattgcagcagcattagagggagaacctattcagcccgaggagccctccactgctctt
gcccccacctctgtgcctgaacctgaggctgatcctggaccagaaccagaggtagtgccc
tttcccgctccccagctcaacacggagcctgaggtccttcctcccgtgcctgaggctgct
actgttgagcccaaccccgaaccaccgcttgagcccgccctccagcctgaacctggaccc
cagccagagcttgcccccccgcccagctgtgacctttcagcttctgatcctatgcctgtc
ctccaatcggagcctgttcttactcttgacctcagtgcagaaccccagcttcttgctccc
gttgctctcctgccagagtctgaccctactctggcccccccagctctggcccccccagct
gacctgcagcaagcacccatgtttgatctcactgccccctttaccctccagcctccaaca
gagttcaaccaagtgaactcactgcctgtatctgaatttgaccaggtggacttacaggct
gtacccggcttcgacccgacatcaacaatgtccagtctgcagtcggcagtccagctggac
ctggctcctcctgtctccaccctgcagcctctagcagaccctggactcccgcctgaagac
gcatttgacctcatcgctgctacaaacctccagccagcagcagaagtggaactcacacct
gctccggaaccagaaacggaagatccatttgacctcatcgctgcttcaaacctccagcca
gcagcagaagtggaactcacacctgctccggaaccagaaacggaagatccatttgacctc
atcgctgctacaaacctccagccagcagcagaagtggcactcacacctgctccggaacca
gaaacggaagatccatttgacctcatcgcttctgcaaacctccagccagcagcagaagtg
gaactcacacctgctccggaaccagaaacggaagatccatttgacctcatcgccgctgca
aacctccagccagtagcggaagtgacaggacatctggaaccattggcagcagaagtagac
ctgacagaagcccttggagctgagcccatcgcccaggaagagatgccagtaaatgaagag
attcctctggaggaggaggcggctccaccagcagaggcagaggccagcctgccaggggag
gctccagtcccagagggcattaaactccgcgtcagtcaaggcgtggatggcctgatcacc
caggccctgctgacgggggacttccagggcgcagtggaactctgtctccatgacaaccgc
atggctgacagcatcatcctggccatcgccggaggggctgagcttctggagaaaacacag
aggaagtacttcaccaagactcacagcaagatcaccaagctgatcagtgcggtggtgatg
agggactggcgtgacatgctgcagacctgtgagctgcagaactggaaggaagctctggct
gcagtcatgacctacgctcagcccgaggagttctcctctctgtgtgacctgctgggctgc
agactggaggctgtggaggactgcacgctgcaggctcaggcttgtctgtgttacatctgc
gctggcaacgtggagaaactggtgacctgctggaccagagcacaggacagacactgccct
ctctctctgcaggatctagtggagaaggtggtggtgctccgcaaggcggtagagcagaac
caggagtctgatccctctgctgtggggcttctactgggggagaagatgagtcagtatgcc
agcctgctggcctcccagggcagcctcaccaacgccatcgcatacctgccccagaacaca
gagcaggttgcggtgcagcagctgcgtgaccgtctcagcagagctctgggtcaacaggct
cctgctgcagccccagtagcccaactcccatcccctcagcccacagctgcccagcccagg
cagctcttcacccctgcccagccttctatggtgtcccagcagcccgctccggcccctgtg
cctgccgctgccaccgcaccgcaacagtattaccagccggtgaggtctgcctctacagtt
acctcctggagtaaccaaactcccacagctctccccagtgtccctcctcctcatctaggc
cctgccaccacagagccccaggttcagccgacaccccccatgtatgggatgcctccctct
gggtcagctgctcccccagcctcctcgtctgctgcatacccccccatgtactcacatcag
taccagccctaccctccggccagccagtacaaccatggcactggtggcccagctatctat
tcacctctccagtactctgctcctcctcctccctccttctcttcctcctcaccccaagcc
ccagccccaggcttcatgccccaatacacccaacaacccctctacccacctccttccatg
ggccagcctgtgtcctccgctcctcctttctctcctcctccgctgtcatctggagcgtct
ttccaacacgggggaccgggttcgcctgcctcgtacataccgccactcccaccaaccgga
tcctcagagggatataatccagacactacctgtttcatggaaggtgaaggcccacagaat
ggctggaacgacccgcctaccctgagcagagtgccaaagaagaagaaggttccagagaac
tacacgcctccttcccccatcatggcccccatcttttctcccctcggtgctggggacccc
cagcagcccccctacatgcctccaggccaggcccagaaccaggccccttaccagggcatg
cagcagcagatggcccccccacccatgaaccctggtatgctcaagacgcgtggaggaagt
gtggagggagcgcccggagccccgactggagataccatacagccgctacagtccatccct
gctgagaagataaccatgaagcccatccccgatgagcacctggtcctgaaaaacaccttt
gagggcctcatccacaagtgcttggctgctgccaccgatcctcaaaccaagaggaagctg
gatgacgccaacaaacgccttgtggccctctacgacaagctacgagagcagactctctcc
ccagccatcctagggggcctgcacaacatggtgcagtgcatcgagtctcgatcctacgtg
gagagcctcaacatccacacacacatagtgagcagcagcaacttcagtgagacgtctgcc
ttcatgcctgtactcaaggtggtgttgacccaagccaacaaactgggggtctga
DBGET
integrated database retrieval system
