Oncorhynchus keta (chum salmon): 118387856
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Entry
118387856 CDS
T09424
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118387856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118387856
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
hnRNP proteins
118387856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
118387856
NCBI-ProteinID:
XP_035632537
LinkDB
All DBs
Position
9:41703206..41714030
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AA seq
434 aa
AA seq
DB search
METEIEQQEEETTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLVGGKPDRVV
ECIKVILDLVSEAPIKGRAQPYDPNFYDETYDYGGFTMIYEERGRRPMGGFPMRGRGGFE
RMPPGRGGRPMPPSRRDYDDMSPRRGPPPPLPGRGGRGGSRARNLPLPPPPPPRGGGDRF
SHQSYHGNMDDRPNSDRRGRPGDRYNSMSGGYGDNNSSWEPFQSGGRGSYSDIGGPVITT
QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYL
LQNRHVLAPFPLLR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaatcgagcagcaggaagaagagaccacgttcagcaacactgacactaac
ggtaaacgccctgccgaggacatggacgaggagcaggccttcaagcgctctcgcaataca
gacgagatggttgagctgcgggtactgctgcagagcaaaaatgctggcgccgttatcgga
aagggtggcaagaatataaaagccttacgcacagactacaatgccagtgtatcagtccct
gacagcagtggcccagagcggatcctgagtgtgagtgcagatattgacactatcggagag
attctgctgaagatcatccctactctggaagagtaccagcattataacgggattgatttt
gactgcgagctgcgtttgctgatccatcagagtttggccgggggaatcatcggggtgaaa
ggtgccaagataaaggagttaagagagaacacccagaccaccatcaagctgttccaggag
tgttgtcctcagtccactgaccgtgtggttctggttggagggaagccagaccgtgttgtt
gaatgcatcaaagttatcctggacctggtatctgaggctcctatcaaagggcgcgcccag
ccctatgaccccaacttctacgacgagacgtatgactacggcggcttcaccatgatttac
gaagagcggggccggcggcccatggggggcttccccatgcggggcagggggggctttgaa
cgcatgccccccggccgcggtggccgacctatgcccccctccagacgggactatgacgac
atgagccctcgtcggggaccgccccctcccctgccaggtagaggagggcgtggagggagc
cgggctcgaaacctgcccctccccccaccaccacccccaagaggaggaggggaccggttc
tcccaccagagttatcacggcaacatggacgacagaccaaacagcgacaggagagggaga
ccaggagaccgctacaacagcatgagtggtggatatggtgacaacaattcttcgtgggag
ccctttcagtctggtggccgagggtcatacagtgacatcgggggtcccgtcatcacaaca
caagtgaccatccccaaagatctggccggctccatcatcgggaagggcggccagcggatc
aagcagatccgtcacgagtcgggagcgtccatcaagatagacgagccactagagggctca
gaggaccgcatcatcaccatcaatggaacacaggaccagatccagaacgcccagtatcta
ctgcagaacaggcatgtgctagcaccctttcctcttctccggtga
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