Oncorhynchus keta (chum salmon): 118387888
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Entry
118387888 CDS
T09424
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oke01100
Metabolic pathways
Module
oke_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118387888
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118387888
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
118387888
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118387888
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118387888
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
118387888
NCBI-ProteinID:
XP_035632596
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Position
9:43190005..43236419
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AA seq
564 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGLGVGAAGGIGA
GQSGPPGREDYQAMLAEREEQHKLHMASLKKQIAQLKEALQERSEQLKGVQDTMERAAGR
GQGGQSPGGGALGEGGQGPGADRSHTDLQEFLRSQLGRAEVHQGTRLPNEYAVVPFESFT
LQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALRSLNTPRDGTDKGRTTKVYSPSDF
IEGIARTEKDKGTLYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVPINIIVPL
SQRADKFRQFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENTSREINFKNFSLLQ
LNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNAQPGKKVFYPVLFSQ
YNPTLIYGNHDHIPPVEQQLVIKKDTGLWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGE
DVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQLGM
LFFRHEIEAHLRKQKPQRSIAKKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgtgctattggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccacgccctgccacgccccgggctgggggtaggggcagcagggggcataggggcg
ggtcagagcgggcccccggggcgggaggactaccaggccatgctagcggagcgcgaggag
cagcacaagctacacatggcgagtctgaagaagcagatcgcccagttaaaagaagcactg
caggagcgtagtgagcagctcaaaggagttcaagacacaatggaacgggcagcagggaga
ggccagggcggacagtccccaggaggaggtgccctcggggagggggggcaggggcctggg
gctgacaggagccacacggacctccaggagttccttcgcagtcagctgggccgggcagag
gtccaccaggggaccagactacccaatgagtatgccgtggtgccctttgagagcttcacc
ctgcagagggtgtaccagctggagatgggcctgaccaggcaccctgaggagaagcccgtg
aggaaggaccggagggatgagctgagtgaagcgctggagacagccctgcggagcctcaac
acaccccgagacggaacagacaagggccggaccaccaaggtctactccccatcagacttc
atagaaggtatcgctcggacggagaaggacaaaggcactctgtatgagctcaccttcaaa
ggggaccagagccgtgagttcaggaagctggttctgttccgtccctttgggcccctgatg
aaggtgaagaacgagagggtggacacggctaacgtccccatcaacatcatagtgcccctc
tcccagagggccgacaagttcagacaattcatgcacaacttcagagaggtgtgtgtgcgg
caggatgggcgtgtccacctcacagtggtgtattttgggaaggaccagatgaatgaagtc
cggagcaccctggagaacacgtctagggagatcaactttaagaacttctccctgctccag
ctgaatgaggagttctccaggggacgtggcctggatgtgggcgccagggcgtggaaggga
ggaaacgtcctcctcttcttctgtgacgtcgacatctactttaccgctgacttcctgaac
acctgccgtctcaatgctcaacctggtaagaaggtcttctatcctgttctgttcagccag
tataacccaaccctgatctacggtaatcatgaccacatcccgccagttgaacagcagctg
gtgattaaaaaggacacaggattatggagagactttggcttcggaatgacgtgccagtac
cgatcagatttcatcaacataggtggttttgacgtggacatcaaaggttggggtggtgag
gatgttcacctttacaggaagtacctgcacagcaacctgctggtggtccggtccccatcg
cggggcctcttccacctgtggcacgagaagcgctgtgctgacgagctgcccccggagcag
tacaggatgtgcatgcagtccaaggccatgaacgaagcctcacacggccagctgggcatg
ctcttcttccgacacgagatcgaggcacacttgcgtaagcagaaaccccagcggtccatt
gccaaaaagacatga
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