Oncorhynchus keta (chum salmon): 118387903
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Entry
118387903 CDS
T09424
Name
(RefSeq) survival of motor neuron protein-like isoform X1
KO
K13129
survival motor neuron protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118387903
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
118387903
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GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
Motif
Other DBs
NCBI-GeneID:
118387903
NCBI-ProteinID:
XP_035632628
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Position
1:54410592..54426024
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AA seq
340 aa
AA seq
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MDEYYESIVFRSERVEDNVSLAVATDDSALVNAYEEALRTFRSCNDEKESKEKLGNNPPK
LTDSKLPRSHVLSKEPVEPKANSKVWRLGYRCRAVYSEDGLVYPAVLVWLRGERCRVKFE
GYGNEEELELSSLLSPVELGGHRGRVDAKVQQGAVDGFSSTSNNIADWKRMERDWRTAQQ
EGREELSSPQPPKFAPVSLGAVPSVSGHLEYIVDQWPCFTEGKDYCKSSYDFGKEHGDKK
KPSGQREVPNNHPFSFFPPVPPPKVSLDFLPPPPPPRPPCVWPPRAVLADVSDGLDSAVT
DLSSMLLSWYLCGYHTGCYMAMQQTKTSRRRADKEKQAEE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatattatgaaagtattgttttccgaagtgaaagagtcgaggataacgtgtct
ttagctgtggctactgacgactccgcactggtaaatgcctatgaagaagccctccgaaca
tttcggagctgtaatgatgaaaaagagagcaaagagaagcttggaaacaacccaccgaaa
ttgacagactcaaaactccccagatctcatgtgttgagtaaggagccggttgaaccaaag
gcaaactcaaaggtgtggaggctgggataccggtgtcgtgcggtgtactccgaggatggc
ctggtttacccagcggtgctggtgtggttgagaggcgaacgctgccgggtgaagtttgaa
ggctacggaaatgaggaagagctggagctgagcagcctgctatctccagtagaactggga
ggccacagaggaagagttgatgccaaagtgcaacaaggggctgttgatgggttcagctcc
actagtaacaacattgctgattggaagaggatggaaagagattggaggacagctcaacaa
gagggacgagaggagctgtcctcacctcagccacctaagtttgctccagtgagtctgggt
gctgttccctctgtttcaggacacctggaatacattgttgaccaatggccatgctttact
gagggaaaagactattgcaaaagcagctatgactttggcaaggagcatggggataagaag
aagccaagtggccagcgagaggtaccaaacaatcaccccttttccttctttcctccagtg
ccaccgcccaaggtctctctggacttcctgcctcctcctcctcctccacgtccaccgtgt
gtatggcccccccgagcagtgctggccgatgttagcgatgggctagactcagccgtgaca
gacctatcaagcatgctcctgtcctggtacctgtgtggctaccacaccggctgctacatg
gcaatgcaacagacgaaaacaagtcgcaggagggctgataaagagaaacaggcagaggaa
taa
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