Oncorhynchus keta (chum salmon): 118387911
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Entry
118387911 CDS
T09424
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118387911
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118387911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
118387911
NCBI-ProteinID:
XP_052381917
LinkDB
All DBs
Position
9:44023703..44161257
Genome browser
AA seq
1092 aa
AA seq
DB search
MEDKASVGKISVSSDSVFTLNSEDFVLVSRLDDTPGSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQKELEDVLMDPSVAEQALGGGVPSGGSVDQAGGVDHVLSPTMAAPPEPQ
PCPDLLGTPPKVEMVLPVQSAAQESELNERSYRGDESSSECSPSTPIPDEDSVVFNKLTY
LGCASVNAPRSEVEALRMMTILRGQCQLPLDVTLSVPGVSEGTVRLLDPQTSTEIASYPI
YKILFCVRGHDSTPESDCFAFTESHYNAEIFRIHVFRCEIQEAVSRILYSFATAFRRSTK
KTLLSGLAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRPGMDKKIVIY
VQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQF
QAVNEETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPFSKRNYTETY
YLKLRQMERKSNNDTLYEVLSLESESERERKKTTASPNILQSSSHGSMVPSPPEDDEEED
NDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVPEALRGEVWQ
LLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKA
YSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFFQ
LERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIF
NVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKY
EKEYHAMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNA
EEKADALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEY
KQICSQLSERLEKQQAANKGELEKIQLKVEGCEKCSILFSKEGRLKAARKLKEGSEEETD
EEKEALKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTWFNRTLTSI
KTATGAQGKETT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaggcctcggtggggaaaattagcgtgtcgtccgactccgtgttcaccctg
aacagtgaggactttgtgctggtgtcgcggctggacgacaccccaggctcctccactaat
aacggtagcgatgacgaaaagaccggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaacggcagtgagcagcagttgcagaaggagctggaggatgttctgatg
gacccctctgtggctgagcaggcgctgggtggtggcgtccccagtggtggcagtgtggac
caggcaggcggggtagaccatgttttgtcccccaccatggcagcaccacccgagccccaa
ccgtgccctgacctcctcggcaccccgcccaaagttgagatggtgctacccgtccaatct
gcagcgcaggagagtgagctgaatgaacgatcttaccgcggggatgagtcgtcatcggag
tgcagccccagtacgcccatcccagacgaggacagtgtggtcttcaataagctgacctac
ctgggctgtgcctcggtcaacgctccccgcagtgaggtggaagcgctccgtatgatgacc
atactcagagggcagtgccagctacccctggacgtcaccctgtctgtgcctggagtctca
gagggcaccgtcaggttgctggacccccagacaagcacagagatagccagctaccccatc
tacaagatcctgttctgtgtgcggggtcacgacagcacgccagagagtgactgcttcgcc
ttcacggagagtcattacaacgcagagatcttccgcatccatgtcttccgttgtgagatc
caagaggcggtcagcaggatactgtacagcttcgccacggcctttaggcggtccaccaag
aagacgctcctctcgggcttggctccacccctgactccagacagcgacgtcttcaccttc
accgtcagcctggagatcaaggaggatgatggcaaagggacctttagtgctgtggcgaaa
gacaaagacaagaacagcttcaagctgcgtccgggaatggacaagaagatcgtcatctac
gttcaacagacgtctaataaggagctggccatagagaggtgcttcggcctcctgctgagt
ccaggaaagaacgtgaagaacagtgacatgcacctgcttgacctggagtcgatggggaag
tcctctgatgggaagtcctacatcatcacagggagctggaatcccaacacacctcagttc
caggctgttaacgaggagacacccaaagataagttcatgtacatgacgacggcggtggac
ctggtgatcaccgaggtggaggagccggttcgtttccttctggagaccagggtcagagtc
tgctctcccaacgagaggctattctggcccttcagcaaacgcaactacaccgagacctac
tacctgaaactcagacagatggagcgtaagagtaacaacgataccctgtacgaggtgctg
agcctggagagtgagtcagagagggagaggaagaaaaccacagccagccccaacatcctg
cagtcttcctcccacggctccatggtgccatcgcctcccgaggatgatgaggaggaagac
aatgacgagccgttgctgagtggctcgggagacgtgtcaaaggagtgtgctgagaagatc
ctggagacctggggagacctgctgtccaaatggcacctgaacttgtcggtgcgtcccaag
cagctcccggcgttggtacgtagtggcgtaccagaggccctcaggggagaggtatggcag
ctcctggccggttgccataacaatgaccaccaggtagaggagtaccgcaccctcatcacc
aaggagtctccccaggacagtgccatcaccagagacatcaacaggactttcccagctcac
gactatttcaaggacactggaggagacggccaagactcactctacaagatctgcaaggcc
tactcagtgtatgatgaggagattggctactgccaggggcagtctttcctggctgcggtg
ttgctgctgcacatgcctgaggagcaggcctttagtgtcctggtcaagatcatgtttgac
tatggactcagggagctcttcaagcagaactttgaggatctacactgcaagttcttccag
ctggagcgactcatgcaggagtacatcccagacttgtataaccacttcctgaacgtgggt
ctggaggctcatatgtacgcctctcagtggttcctcacgctcttcacagccaagttcccc
ctctacatggtgttccacatcatagacctgcttctctgtgagggcatcagtgtgatcttc
aatgtggctctggctctcctgaagacctcgcgagaggacctgctggcgactgactttgag
ggggcgctcaagttcttccgagtcccggttcccaaacgctaccgctcagaggagaacgct
aagaaacttatggaactggcctgcagcatgaagatcagtcagaagaagctgaagaagtac
gagaaggagtaccacgccatgagagagcagcaggaacagcaggaagctcccattgagaga
tacgagagggagaaccgtcgtctccaggaggctaacatgcgtctggagcaggagaatgat
gacctggcccatgaactggtcagcagcaagatcgccctgcgcaaggacctggacaacgct
gaggagaaagcagacgctctgaacaaggagctgttgatgaccaaacagaagctggtggat
tcggaggacgagaagaggcggttagaggaggagtctgcgcagctgaaagagatgtgtaga
cgggagctggacaaatcagagtctgagataaagaagaacggttccatcataggagagtac
aaacagatctgctcccagctcagtgagcgtctggagaaacagcaggcagccaacaaggga
gagctggagaagatccagctgaaagtcgaaggctgtgaaaagtgctccatcctgttcagc
aaggagggtcgtctgaaggcagcgaggaagctgaaggagggcagtgaggaggagacggac
gaggagaaggaggctctgaagaaccagctccgagagatggagctggaactggcccagacc
aaactacagctggtggaggcagagtgcaagatacaggacttggagcacaccctgggtctg
gctctcaacgaggtccaggctgctaagaagacctggttcaacagaaccttaacctccatc
aagaccgcgacgggagcacagggcaaggagaccacctaa
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