KEGG   Oncorhynchus keta (chum salmon): 118388075
Entry
118388075         CDS       T09424                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oke03009]
    118388075 (wdr18)
Ribosome biogenesis [BR:oke03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    118388075 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML WDR55 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_VPS8 Ge1_WD40 WDR54 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 118388075
NCBI-ProteinID: XP_035632828
LinkDB
Position
1:complement(54762998..54855387)
AA seq 431 aa
MSAPMEIVLSADSAGQLWNCAVLELHSGTNLLAYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYLVAGIADAIYLWEVSSGNLLAILSRH
YQDLTCLRFSDDSSHFISGGKDNLALVWSLASVVQLDPSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWELSSGEMLLSVLFDVGIMSVTLDPCEYYLFCGGSDGGIF
QVSLCSQSLSRDKTFQSDNEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETIRLWDIQS
KQSVRSINHKGPVTNALIIPAPANMFLPDSRPGIPLPRFSRHLNPSEQGEGVETGGVCLR
LAPHNQAQKETYLEKADKLYSIMSAVTDKCVFGDGENTKVRVSELEEEVRTLKKVNKDLY
DFSTQLLTKPS
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtccgcgcctatggaaatagttctgagtgccgattcggctggacagctatggaactgt
gccgttttggaactccattcgggcacaaatctcttggcctatcgaggtggcaatacttct
tcgaggtcactcacagttttgaatggagagtacatcctcggagcccaactcgggaaaaac
ttcatcaacgtgtgggaaatccagagaaaggatcagctgcagcagaaaattgtgtgccct
gggattgtgacatgcttgactgcatcccccaatggcctgtacttggtggcaggcattgct
gatgccatctacttatgggaggtttcctctgggaatttgctggccatcttgagccgccat
taccaagacctgacctgcctacgcttcagtgacgacagcagccatttcatctcaggaggc
aaagacaacctggcactggtctggagtctagccagtgtggtgcagctggatccgtcacac
accccagagcctcgtcatgtcctgtcccgtcactctctccccatcaccgacatccactgt
ggcctgatgggaccccaggctcgagtagctactgcatccctggaccagacagtcaagctt
tgggagctatcctctggcgagatgctcctgtctgttctttttgacgtaggcatcatgtca
gtgacccttgacccctgcgagtactacctattctgcggtggcagtgacggcggtatattt
caggtgtccctctgtagccagagcttaagtcgggataagacgttccagtcggacaacgag
ggcaaccaggtttttaaaggacacaggaacctagtgacatgtctgtctgtctctatggat
ggcactctcctcctctcgggctcccacgatgagaccatacgactgtgggacatccagagc
aagcagagcgtccgcagcatcaaccacaaaggtccagtcacaaatgccctcatcatccct
gcccctgccaacatgttcctgcctgacagccgcccgggcatacccctgccccgcttcagc
cgccacctcaacccctcagaacagggcgagggcgtggagaccggaggagtgtgcctgcgc
ctggccccccacaaccaggcccaaaaggagacctatttggagaaagcagacaaactctac
tccatcatgagtgccgtaacagacaagtgtgtgtttggtgatggcgagaacacaaaggtg
cgtgtgtcggagctggaggaggaagtgagaacgctgaagaaggttaacaaggacctgtac
gacttctccacacagctcctcaccaagcccagctag

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