Oncorhynchus keta (chum salmon): 118388078
Help
Entry
118388078 CDS
T09424
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118388078
04020 Calcium signaling pathway
118388078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118388078
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118388078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
118388078
NCBI-ProteinID:
XP_052381584
LinkDB
All DBs
Position
9:28479740..28713055
Genome browser
AA seq
2499 aa
AA seq
DB search
MERRAPNYSKWAERRSTVVYAMRSATFGSWRMLTLGTEYSSWAQSPESLRQRQAVISENA
EETDSIDIDSSWQQMDVPQQYDAILHLDERAASGGSRGNHNIIRTHEALNSTPWSKSNRM
ARFAEGLPTRFGAGAGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPNP
VKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPENDK
TPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVG
SDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVE
FYMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAV
LTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE
RVEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDGAWYKRKHNL
PVLKRGKVKKSKNDLIGAEEGDDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERR
IRFFIRRMVKAQSFYWVVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMS
LKMYGLGARNYFHSSFNCFDFSVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTK
YWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFP
AAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSS
VSSVHSPKEQQRANKIMSVWEQRTNQLRRNNLRASSEALFNELDPEERLRVSSALHLRSD
MKTHNDRPLVVEPGNGDNPRPPEEDRDGADPQQEGGDPHGPQPHKHYRHRERNGENGESR
HHTHHSRSRDHYHPDGPRSKEGKVERNHSREGGQGHRHHHQAESPEEGVNGGGEGREDHH
HHSDRQGNRALATRDRLESRGRGHREENGERRKHRSRRVRAQSTLDGDECRENGERNGDR
DQGHRDRQTDSQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVT
ITAPSRETTIIPMDNIDCESLRLNEEKKDLEEELKNGPKHILPYSSMFVFGQTNPVRRLC
HYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMI
DLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCR
GKFLDYDGDEVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDAG
PSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFA
INAKPLTRYMPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPEMYEAML
KHLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKDKLINLS
FLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIE
LNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDF
AYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFVRVWAEYDPAACGR
MTYLDMYEMFRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALE
IKLASGVLAQRLCDADLRKEISRVWPNLPPNTIDLLVTPYKNDEFNELLCPFAVVNRELT
VGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFCPMPMTHMQGEGTTVSR
ANPLPSSQPEPESQPEPTPSTTTLTNGEAVPSTRSPIKESEEQLSQEGQRSSSRKRILQR
GQSEDVPYSNKPQESVEMRQVENGADLGGYSGLDGHGRAASMPRLDSQYNRNHPRHLPGT
YLAPIADISPIRRSASTLASQCHREMSLRDYTLERPSQAQAQASSAPGQAQDRPHHHHHH
RCHRRRDKDRDKKQKSLDRATSVQPSSTACSSVDPLVEGLTRERARERDRGRPHEKRHHS
AAGETKRYYSCERYVGREHCHTKSAGPSRSTSPGETHDLGLLKQSIRMSKGSQVVLTFGS
SPSCRGRRQLPQTPLTPRPAVAYKTGNSLPMQFGSTGHQSFLSRGLSERNALLESPPIPV
TLIGLDPNLSPCPRNAPPCRLPEEPDDFQDAVSNHGGSHSPRIIASASHGAAGPSSAPAP
QGRFGIPNGYHFTLGVNAVSSSSPRGTGSFREKEEDDWC
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggccccaaactactccaaatgggcggaaaggcgatccactgtggtttat
gcaatgcgctctgccacattcggctcatggaggatgctgactttgggcacggaatacagc
tcatgggcccagtctcctgaaagccttcgtcaacgacaggcagtgataagcgagaatgct
gaagaaacagacagcatcgacattgactcgtcatggcagcagatggacgttcctcaacag
tatgatgccatcctgcaccttgacgagagagcagcttcaggagggagtcgtggtaatcat
aacatcattcgtacacacgaagccctcaatagcacgccatggtctaagtctaacagaatg
gctcgcttcgcagaaggtctacccacccgctttggagctggagcaggtggaggaggcaga
ggtgcgcccggcgcaggcagagggggcgcccgggctggtggtcctccgggcggccaaagg
atgtacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaaccct
gtcaaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctc
attaggaagtatgctaagcgaataaccgaatggcctccgtttgagtacttgatcctggcc
accatcatcgccaactgcatcgtactggccctggagcagcacctaccagaaaatgacaag
acccccatgtctgaacgtctggatgacacggagccctactttattggaatattctgtttc
gaggctggcattaagattatcgccttgggctttgcatttcacaaaggctcgtacctccgc
aacggctggaacgtaatggattttgtggtcgtcctcactgggatcctggccacggtgggc
tcagactttgacctgaggactctgcgagcggtgagagtactgagaccactcaaactggtg
tctggcatccccagtcttcaggtggttttgaagtctatcatgaaggccatggtgcctctg
ctccagataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggag
ttctacatgggcaagttccactccacctgcttcactgtcgacactggtgagcgagcagca
gcgttcccctgtggtacggaggccccagccaggatgtgtcctaatggtacagagtgtaca
gagtactggatcggccccaactacggcatcaccaactttgacaacatcctgtttgccgtg
ctcactgtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgctaac
gatgcctcggggaacacctggaactggctctacttcatccccctgatcatcatcggatcc
ttcttcatgctcaacttagtcctgggtgtcttatcaggggagtttgccaaagaaagagag
cgtgtggagaagaggcaggactttctaaagctgcgcagacagcagcagatagagagagag
ctgacaggatacctggagtggatatgcaaggcagaggaggtgctgctggaggaggaggat
gagaacgcggaggaaaagtcccctctggacggtgcgtggtacaagaggaaacataacctc
ccagtgttgaaacgaggcaaggtaaagaagagtaagaatgacctgattggtgctgaggag
ggagacgatcacttcactgacatgtcctctgttgcccccccaggctctccgtttggccga
gccagcgtgaagagcagtaagctggagagctcgtcctacttccgccgcaaggagaggaga
atacgtttcttcatccgtcgcatggtcaaagcccagagcttctactgggtagtactatgt
ctggtgggcctcaacaccctgtgtgtggccatcgtccactacgaccagcctgagtggctc
accactgccctctacctggcagagtttgtgttcctgggtctgttcctgtctgagatgagc
ctgaagatgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgac
tttagtgtgataatagggagtatacttgaggtggtgtggtctatgatcaaaccaggggca
tcctatggcattagtgtgctgagggctcttcgtctgctcaggttattcaaatttaccaag
tactggaactccctgaggaacctggtagtgtctcttctcaactcaatgaagtccattatc
agcttgctcttcctcctcttcctcttcatcgttgtctttgccctgctgggcatgcagctc
ttcggaggacagtttaattttgaagaggagacgccaacgaccaacttcgacactttcccg
gcggccattctcaccgtcttccagattttgactggcgaggattggaatgcagtgatgtat
catggtattgagtcccaggggggcgtacggcgggggatgttctcctcggtctacttcatc
gtcctcacactctttggaaactacacgctcctgaatgtcttcttagctatcgccgtcgac
aacctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaat
aagaagctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagcc
aacatctctatcgctgcttttgtaaagcaaaatcgagatgcactctctcgcagctcgtcc
gtctccagcgtgcattcacctaaggagcagcagagagccaataagataatgtcagtgtgg
gagcagcgcaccaaccaactgcgtcgaaacaacctgagagccagctccgaggctctgttc
aacgagctggaccccgaggagcgtctgcgggtctcctccgccctccacctgcgctctgac
atgaagacccacaacgaccgccccctagtggtggagccaggtaacggggacaatccccga
ccccctgaggaggacagagacggagcagacccccagcaagagggaggagacccccacggt
ccacaaccacataagcactaccgtcaccgggagaggaacggggagaatggggagagcagg
catcacacccaccacagccgcagtagggaccactaccacccagacgggccccgatccaaa
gagggcaaggtggagaggaaccatagtcgagagggggggcagggccacaggcaccatcac
caggctgaatccccagaggagggggttaacggagggggagagggaagggaagaccaccac
caccactccgacagacaggggaacagggccctggctaccagggacagactggagagcagg
ggccggggccacagggaggagaacggagaaaggaggaagcaccgctcgcgcagagtcagg
gcccagtcaacactggatggagacgagtgtagagagaatggagagagaaatggagacagg
gaccaaggacacagggacagacagaccgactctcaaggggagagcttggccaccagtcct
gtgcagcctcctgcaggtctgcaggctggagagaagcaagaggatgctgacaaccagaag
aacagccacagagccagccaggcaggcctgaacagcaacactgtccacatccctgtcacc
atcaccgccccatccagagagaccaccatcatacccatggataacatagactgtgagagc
ctccgcctgaacgaggagaagaaggacttggaggaggagctgaagaacggtcccaaacac
attctcccctacagctccatgtttgtgtttggacagaccaacccggtgcgtcggctgtgc
cactacgtggtgaacctgcgttactttgagatgtgtatcctgtcggtcatcaccatgagc
agcatagccctggctgctgaagaccctgtgcaggccaatgcaccacgcaacaacgtgctc
aagtatctggactacgttttcacaggagtgttcacctttgagatggtgattaagatgata
gacctgggactgctccttcatcctggttcttacttccgggacctgtggaacatcctggac
tttattgtggtcagtggagctctggtggcgttcgcctgctcaggaactaaaggcaaggac
atcaacaccatcaagtctctcagggtgctgcgagttctaaggcctctgaagaccatcaaa
cgactgccaaaactcaaggccgtgtttgactgtgtggtcaactctctgaagaacgtgctc
aacatcctcattgtctacatgctcttcatgttcatcttcgctgtgatcgctgtgcagctg
ttcaagggcaagttcttctactgcaccgatgagtctaaaggtctggagaaggactgcagg
ggtaagtttctggactatgacggtgatgaagtggcggcccaggatcgtgagtggaggaag
tatgagttccattacgacaatgtgctgtgggccttcctcaccctattcaccgtctccacc
ggggagggctggccaatggtcctaaagcattctgtggatgccacctatgaggatgcgggt
cccagcccaggcttccgtatggagacctctatcttctatgtggtctactttgtggtcttt
cccttcttctttgtcaacatctttgtggctttgatcatcatcaccttccaggagcaggga
gacaaggccatgtcagagtgtagtctggagaagaacgagagagcttgtatcgactttgcc
atcaacgctaagcctctgacgcgctacatgccagcagacaagcagtcgttccagtataag
atgtggcagtttgtggtgtcgccgccctttgagtactccatcatgaccatgatcgcactc
aacactgtggtgctgatgatgaagtttcacggtgctccggagatgtatgaggccatgctg
aagcacctgaacattgtgttcacagctctcttcacactagagtgcatcctcaagatcatc
gctttcggaccactgaattacttgaaggcagcttggaacgtgtttgactttgtgacagta
ttggggagtatcacagacatcttggtcacagagattaaggacaagttgatcaatctgagt
ttcttgaggctgttcagggcggccaggctcatcaagctgctgaggcagggctacaccatt
cgcatcctgctatggacctttgtccagtccttcaaggccctaccttacgtctgcctcctc
atcgctatgctcttcttcatctacgccatcatcggcatgcaggtgtttggaaacattgag
ctgaatgaggaatcagccatcaatcaccacaacaacttccagaccttcttccaggctctg
atgcttctgttcaggagtgcaacaggtgaggcgtggcatgagatcatgctgtcgtgtctg
agtaaccgtccgtgtgataagctgtcagggtctggagggaaggagtgcggcagtgacttt
gcttatttctactttgtctccttcatcttcctctgctccttcctgatgctcaatctgttt
gtggcggtcatcatggacaactttgagtacctgaccagagacgcctctatcctggggcct
caccacctggacgaatttgtccgtgtttgggccgagtacgaccctgctgcctgtggccgt
atgacctacctcgatatgtacgagatgttccgtcacatgtcccctccactaggtttggga
aagaaatgcccgcccagaatcgcctacaagcgattggttaagatgaacatgcccattgcc
gatgacaacacggtgcacttcacgtccactctgatggcgctcatccgcactgctctggag
atcaaactggcgtctggagtcctggcccagcgtctgtgtgacgctgacctgaggaaagag
atctccagagtctggcccaacctgcctccgaacactatcgacctgctggtcacaccatat
aaaaatgatgagttcaatgagcttctttgcccctttgcggttgtaaaccgagagctgaca
gtggggaaggtctacgctgccctcatgatctttgactactacaagcagaaccgggccaag
agactggaacagcaactgggactggacttcacagggacaattaagaataaaaagggccca
gccttcttctgccccatgcccatgacccatatgcagggtgaggggacaacagtctccaga
gccaatcccctgccatcctcccaacctgaaccagagtctcagccagagcccacgccatcc
accaccactctaaccaatggggaagcagtaccaagcactagaagtcccataaaagagtca
gaagagcaactgtctcaggagggccaacggtccagcagtagaaaaaggattctacagagg
ggccagtcagaggacgtgccctactccaacaaacctcaggaatcagtggagatgaggcag
gtggagaacggtgctgatttagggggctactctggtctggatggccatggcagagcagcc
tccatgccaagactggactcccagtacaatcggaaccaccctcgtcacctacctgggacc
tacctggcacctattgctgacatcagtcctatcaggcggtcggcgtccacgttggcttcc
cagtgccaccgggagatgagtctgagagactacaccctggagcggcccagccaggcccaa
gcccaggcctcctcagcaccaggtcaagcccaggacaggccccaccaccatcaccaccac
cgctgtcacagacgcagggacaaggacagggacaagaagcagaagtcgcttgacagggca
accagcgttcagccttctagtacagcatgttcgtctgttgacccccttgtggagggcttg
accagggagcgggcgagggagcgtgaccgcggccggcctcatgagaagaggcaccactct
gcagccggggagacgaagcgttactactcctgtgagcgctacgtaggcagggagcactgc
cacaccaagtcagctggccccagccgctccacctcccctggagagacccacgacctaggc
ctcttgaagcagagtatcaggatgagtaaaggcagccaagtggtcctaacctttggatct
agcccatcctgccgtgggcgcagacagctcccccagacccccctgaccccccgccccgcc
gtggcctacaagactggaaactccttgcccatgcagtttggttccacagggcaccagtcc
tttctcagtcgtggactctcggagcgtaacgctctgctggagtcaccccccatacccgtc
accctcattggcttagacccaaacctgagcccctgtccgcggaacgctccaccatgcaga
ctccctgaggagcctgacgacttccaggatgctgtgagcaaccatggagggagccactcc
cctaggatcattgcctcagcctcccatggggctgccgggccctcttctgcacctgcccca
cagggccggtttgggatcccaaacgggtaccacttcactcttggggtcaatgccgtttca
agctccagccccagagggactgggagttttcgtgagaaggaagaggatgactggtgctaa
DBGET
integrated database retrieval system
