Oncorhynchus keta (chum salmon): 118388289
Help
Entry
118388289 CDS
T09424
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04260
Cardiac muscle contraction
oke04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118388289
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118388289
04261 Adrenergic signaling in cardiomyocytes
118388289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118388289
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118388289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
dCache_2
sCache_2
Motif
Other DBs
NCBI-GeneID:
118388289
NCBI-ProteinID:
XP_052382513
LinkDB
All DBs
Position
10:complement(16221050..16628570)
Genome browser
AA seq
1127 aa
AA seq
DB search
MAICAQSYGIFCLFSIQTILIISLSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TQQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKVGS
RLSSMHPILQPKIINFREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDE
RYIDEAMRTYTWTPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEG
HVFIAPREYCNELELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVE
KVWKTKDLTTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFR
APYRTVNDELLNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQ
TSPTSDNRQVQQTCGPTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDHWNKIGMFFSE
VDPYLMHALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWSSAA
AWSLFQQLLYGMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNC
SRLIHAKRLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDMSAARYRKGPAV
CYDYNLSENTSDCGRGHSFHPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatattctgtctgttctcaatccaaactatcctc
atcattagcttatcttcgccggcaacggggagcctccgcttcccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcactgga
acccagcagataagagggatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggacggagatggggaagagaacctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaataaggtcaactactcctacagcgccgtccagatc
cccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggttttcattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatattacccagccactccatggagagcacccaataag
attgacctgtatgacgtccgcaggcggccatggtacatccaaggggcatcatctcccaag
gacatgatcatcatcgtggacgtgagtggcagtgtcagtggactcactctgaaactgatg
aagacgtcggtcatggagatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggctgatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgcccca
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaacaattcgagtatttaccttttcagtt
gggcagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaaggattc
tactatgagattccatccattggagccatcagaattaacacacaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaatgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaacctc
accgctgatgcaaattctcagacgcagcttgtccttggtgtcatgggggtggatgttgca
atcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaaggtaggatca
agactgtcctctatgcatcccatcctgcaacctaagatcattaacttcagagaacctgtc
accctggacttcctggatgctgagctagaggacagtaaaaaggaggagatccgtcgagaa
atgattgatggcaaatcagggcaaaagaaaatcaagactctcattaagtctgttgatgag
aggtacattgatgaggccatgcggacatatacctggacaccagtggagggcacagattac
agtctagggctggtactgcccacatacagtgagaaccacatcaaggctaacctgagtgac
cagatcctgcaggtgcagtattttgaatctctgctgccaaacagttttgagtctgaagga
catgtattcatagctcccagggaatactgcaacgagctagagctctccaacaacaacact
gagttcctgctcaacttcatcgctctcatggagaaggtgacacctgactccaaacaatgt
gacaacctgctccttcataacctcatcctcgacactggcatcatcagacagctggtggag
aaggtgtggaagaccaaagacctcaccacctatggctttctggcagtgtttgctgcaaca
gacggagggattacaagagtgtttcccaacaaggctgctgagacctgggaagaggaccct
gagccttttaatgccagctattaccgccgcagtctggacaacaagggctacatcttcaga
gcgccttatcgcaccgtgaatgatgaactgctgaacccagagaacgacaccataggaatc
ctggtcagcactgcagtggagatcacagtgggagggaaaaccatcaaacctgcagtggtt
ggcgtaaagctggaccttgaggcctgggtggacaaattcaagatcctggctagcaaccaa
acaagtccaacaagtgacaaccgccaagtccaacaaacgtgtggaccaaccagtggctgt
gagatggactgtgaagccaacagcgaagaccttctatgttacctggtggatgacggtggt
ttcctgatcatgtccaatcagaaggatcactggaacaagattggcatgttcttcagtgag
gtggacccctacctgatgcatgctctctacaacaactccttttacaaccggaagcagtcc
tttgactaccagtctgtgtgtgaccccgtgccaagcagcaacaccggggctgcaccaaga
ggagtctttgtgcccaccattgcagactttgtgaacctggcctggtggtcatcagcagct
gcctggtccctatttcagcagctgctctatggaatggcctaccacagttggtttgtcaca
gatgaggtggaggcagaggggatggactccagagagaccagctgtgtgacgatacagact
cagttctacttcactaacatcaacagctcctatgacatcttgcaagactgtggcaactgt
tccaggctgatccatgccaagaggttaaacaacaccaacttgctgtttgtggtggcagag
aagatgccctgcaacacctgtgaggtggagaaactgtcccaggcagagacagagttcaag
gaggataacccatcatgtgaggacatgagtgcagcgaggtatcgaaaagggcccgctgtg
tgctacgactacaatctttctgagaacacatcagactgtgggcggggccactccttccac
ccctcactccagaccctgctcatgattcagctcttcctcctctatccaatcgccagccct
catattctgcctcttttactttaa
DBGET
integrated database retrieval system
