KEGG   Oncorhynchus keta (chum salmon): 118388301
Entry
118388301         CDS       T09424                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118388301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118388301
   03036 Chromosome and associated proteins [BR:oke03036]
    118388301
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118388301
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     118388301
    COMPASS/SET1 complex (yeast)
     118388301
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_DCAF4 RMC1_N Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 118388301
NCBI-ProteinID: XP_035633099
LinkDB
Position
10:complement(16812314..16819669)
AA seq 266 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISRSDDDSLVLYDCQEGKPRRTLY
SKKYGVDLIRYTHAANKVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTALSMSPVDD
TFISGSLDKTIRLWDLRSLNCQGLMHLQGKPVCSFDPEGLIFAVGVNSEMVKLYDLRSFD
KGPFATFKYDRTCELTELKFSNDGKLILVSTNGGALRLLNAFKGAVMHSFGGYNNSKAVT
LEASFTPDSQFIMIVRHSGSTLLMID
NT seq 801 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggttgcaaaggttttccgagaaaat
tcagacaaaatcaactgttttgatttcagctcaaacggcgaaaccattatttctcgcagc
gacgatgactccctggttttatacgattgccaggagggaaaacccaggcggaccctctac
agtaagaagtatggagtggatctgatcaggtacacacatgcagccaacaaggtggtctac
agctccaacaaaattgatgacactatccggtacctctccctccatgacaacaagtacatc
cggtacttccccggacacaacaaaagagtgacggctctctccatgtcccctgtggatgac
acatttatctcaggatctttagacaagacaatccggctatgggacctgcggtctctgaac
tgccagggcctgatgcacctccaggggaagccagtttgctcctttgatcctgagggtctg
atttttgctgtgggtgtgaactctgagatggtcaaattgtacgacctgcgatcctttgac
aagggtccttttgctaccttcaagtatgaccgtacatgtgagttgacagaactcaagttc
agcaatgatgggaagctcatccttgtctcaaccaatgggggtgctctccgcctcctcaat
gccttcaagggcgctgtgatgcattcctttgggggctacaacaacagtaaagctgtgacg
ctggaggcctccttcactcctgactctcagtttattatgatcgtgaggcattctggctcc
actctattgatgattgattga

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