Oncorhynchus keta (chum salmon): 118388366
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Entry
118388366 CDS
T09424
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
118388366
G protein-coupled receptors [BR:
oke04030
]
Rhodopsin family
Vision
Opsin
118388366
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
TctB
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
118388366
NCBI-ProteinID:
XP_035633246
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Position
10:complement(21514995..21517868)
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AA seq
357 aa
AA seq
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MAESWGSAAYAARRQNQDTTRESSFTFTNSNNTKDPFEGPNYHIAPRWVYNVSTLWMIIV
VILSVFTNGLVLVATAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQFFGYFILGH
PMCVFEGYTVSTCGIAALWSLAVISWERWVVVCKPFGSVKFDAKWAMGGIIFSWVWSAFW
CAPPIFGWSRYWPHGLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVW
LAIRAVAAQQKDSESTQKAEKEVSRMVVVMIIAYCVCWGPYTCFACFAAANPGYAFHPLA
AAIPAYFAKSATIYNPVIYVFMNKQFRTCIMQLFGKAEDDGTEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagctggggtagtgctgcttatgcagccaggcgacaaaaccaagatacaacg
agagaatcttcctttaccttcaccaacagcaataacaccaaagatccctttgagggccct
aactaccacattgctccaagatgggtgtacaatgtttcaacactttggatgatcatagtg
gtcatcctctcagtcttcaccaatggcctggtactggtggccactgcaaaattcaagaag
ctccaacaccctctgaactggatcttggtcaaccttgctattgctgacattggagaaaca
cttttggcaagcaccatcagcgtttgcaaccagttttttggctactttattctgggacat
ccaatgtgtgtctttgagggatacactgtctccacttgcggaattgctgctctgtggtcc
ctggctgtcatctcttgggagagatgggtggtggtgtgcaagccctttggaagtgtcaag
tttgatgccaaatgggccatgggaggcattatcttctcctgggtctggtctgctttctgg
tgtgccccccccatctttggctggagcaggtactggcctcacggcctgaagacttcctgc
ggacctgatgtgttcggaggcaatgaggatcctggagtcaagtcctacatgattactctc
atgattacatgctgcttcttccccctgttcgttatcatcttctgctacattttcgtgtgg
ctagccattcgtgctgttgctgcgcaacagaaagactctgagtcaacacagaaggccgag
aaggaagtgtccaggatggttgttgtcatgattatagcttactgtgtatgctggggacct
tatacctgctttgcctgctttgctgcggctaaccctgggtatgctttccaccctctggca
gccgcaattcctgcctactttgccaagagcgccaccatctacaatccagttatatatgtc
ttcatgaacaaacagttccgtacttgcatcatgcagctctttggaaaggcagaagatgat
ggcactgaagtgtctacatcaaaaacagaggtttcctctgtggcacctgcataa
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