Oncorhynchus keta (chum salmon): 118388393
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Entry
118388393 CDS
T09424
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118388393 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118388393 (taf4a)
03036 Chromosome and associated proteins [BR:
oke03036
]
118388393 (taf4a)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118388393 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
118388393 (taf4a)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118388393 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118388393
NCBI-ProteinID:
XP_035633320
LinkDB
All DBs
Position
10:complement(22908574..22920608)
Genome browser
AA seq
957 aa
AA seq
DB search
MQVARQSLNTWPVPGQGLMLMSSRTNGDLLKRLQKQVCCGNVVLLVVSSVNESKHSLICS
PPSLTRVSAPQQGLECKGGVIISNTWSQGSAMDASSSESDSSARHGQGKTVAVSASIITP
LPNHGGKVASSATQTLNGGSLMNCHHSGSAVSLTGTPLSSSCTSSGNASVDVTVVNNGPG
LSKGHASAVMPPSLNTTIIQTSFVNSPNIVTSSHAASLGTGPAISHIVRPSMQTAGSGTA
MNGPNAGLPFDCLNNGQSPSSVAVSAGSHIIMAEAPKTSIQTASCAVTNPSFQSAPRAST
PVTVAASPGGSRSIAQQVLAPRHPQTSPNQPNVQNIQLPPGMVLVRSESGQLLMIHQQTL
AQMQSQSQSQGVMAPRPATPTSTPPFQITSVQAPGTPILTRQVTPTTIIKQGSPVPTSAP
VTTTLQKPPVTTTLQRPPVLQSPMIVVGAAAGTSMGTALSGATQRTVTASPGTTVTLATE
TMENVKKCKNFLSTLIKLASSGKQSSETAANVKDLVKDLLEGKIEVEDFTNRLYRELNSS
PQPYLVPFLKRSLPALRQLTPDSTAFIQHSGLQQQASATTPTTVVLDSPALRPAAPNIRP
HLQSVISKQGLTTPMVLQPRQQGAMVRPLQMTPMVTLRGPPPHSHIMLGQPQVQLKQLQT
VPVVNPGVLTGSKSSPGAASLATVAQKNKLKEAGGTFRSAMDDDDINDVASMAGVNLSEE
SARILATNSELVGAVTRSCKDEAFLHTSTLTSRILEIGKKFGVSDLGPEVVNYVSHASQT
RLQNLLEKVSEVAQQRNINFKEDSRYEQTSDMRAQIKFFEQLDQMEKQRKEEQEREILMK
AAKSRSRQEDPEQLRLKQKAKEMQQQELFQLRQKEANLTALAAIGPRKKRKMEAAAAAAG
AEGSGSSPAASGSGSSGASRQFIRQRITRVNLRDLLFCLENERDTSHSHLLYKGFLK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagccagacagtcgctaaacacatggccagttccgggacagggtttgatgcta
atgtccagcagaacaaacggggacttgctcaagaggttgcaaaagcaggtatgctgtggt
aacgttgttttgcttgttgtttcaagtgtaaacgaaagcaaacactcgcttatttgttca
cccccttctctcacccgtgtttccgctccacaacaggggctggagtgcaaagggggtgtc
attattagtaatacgtggtcccagggttcagctatggatgcctcatcgagtgagtcggac
tcatcggcacgacacggccaaggaaagactgttgctgtcagtgccagtataataactcct
ctcccaaaccacggggggaaagtagcctcttccgcaactcaaactttgaatggaggcagt
ttaatgaactgtcaccattcaggaagcgctgtctctctcactgggacaccgctgtcaagt
agttgcacgagtagcggcaatgcctcggtagatgtcacagttgtcaacaacgggccgggg
ttgtcaaaaggacatgcgagcgcagtaatgccaccttcattgaacaccactatcatccag
acatcattcgtgaactctccgaatattgtcacctcgtctcacgctgcgagtctgggcact
ggacctgccatatcacatattgtgaggccatctatgcaaactgcgggatctggtacagcg
atgaatggtcctaatgcgggattgcctttcgattgcctgaacaatggtcagtcgccctcg
tctgtggctgtcagtgcggggtcgcacataatcatggcagaggcgcccaaaacaagcata
cagactgcttcatgtgctgtaacgaacccgtcgttccagagtgcaccgagggcttccact
ccggtgacagtggctgcgagcccgggagggagccgttctatcgcgcaacaggtgttggcg
cctcggcacccgcagacatccccgaaccagcccaacgttcagaacatccagcttccccca
ggtatggtcctggtgcgcagtgagagtgggcagctgttgatgatccaccagcagaccctg
gctcagatgcagtcccagtcccaatcccagggagtcatggccccccgcccagccaccccc
accagcactcctcctttccagatcacctcagtccaggctcctggaacgcccatcctcact
aggcaggtgactcccaccactatcatcaagcagggctcacctgtgccaacctctgctcct
gtcaccaccacactccagaagcctcctgtcaccaccacactccagaggcctcctgtccta
cagagtcccatgattgtggtaggggctgctgcaggcacttctatggggacagcgctatca
ggggccacccagaggaccgtcaccgcatcacccgggaccactgtcaccttggcaacggag
acgatggagaatgtgaagaaatgcaagaacttcctgtctacattaatcaagctggcgtcc
agcgggaagcagtcctcagagactgccgccaacgttaaagacctggtcaaagatctcctg
gaagggaagattgaagtcgaggacttcaccaacaggttatacagagagctcaactcctca
cctcagccttacctcgtgcctttcctcaagaggagccttcctgctctgcggcagctcacc
ccagactcaacagccttcatccagcacagtgggctccagcagcaggcctctgccaccacc
cccaccactgtggtactggacagcccagccctgcgccctgcagccccaaacatcagacca
cacctccagtctgtcatcagcaaacaggggctgactaccccaatggtgctccagcctcgg
cagcagggggcaatggtaaggcctcttcagatgacccccatggtgaccctcagaggaccg
cccccccacagtcacatcatgctgggacagccacaggtgcagctcaaacagctacagaca
gtccctgtagtgaatcctggagtgttgactggatctaagtcgtctcctggtgctgcctct
ctggccactgtagctcagaagaacaagctgaaggaagctgggggcacattcaggtcagct
atggatgacgatgacatcaatgatgtggcatctatggctggggttaacctgtctgaggag
agtgcccgtatcctggcaaccaactccgagctggtgggagcggtgacacggtcctgtaag
gacgaggccttcctccatacctccacactgaccagtagaatactggaaataggtaagaag
tttggtgttagtgatctggggccggaggtagtgaactacgtgtcccacgcttcccagacc
aggcttcagaacctgttggagaaagtctctgaggtggcccagcagaggaacatcaacttc
aaggaggacagtcggtacgagcagacgagcgacatgcgtgcccagatcaagttctttgag
cagctggatcagatggagaaacagaggaaagaggagcaggagagagagattctgatgaag
gcagcaaagtctcgttctcgtcaagaagaccctgagcagctgcggttgaaacagaaggcc
aaagagatgcagcagcaggagctgtttcagttgagacagaaggaagctaacctgacggcg
ctggcagccataggccccaggaagaagaggaaaatggaggctgcagccgctgcagctgga
gctgagggctcagggtccagtcccgctgcgtctggtagtggtagttcaggagcatccaga
cagtttatccgccagcgcatcactcgtgtcaacctcagggacctgctcttctgtttggag
aatgagagagacaccagtcactcccatctcctctacaaaggcttcctcaaatag
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