Oncorhynchus keta (chum salmon): 118388517
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Entry
118388517 CDS
T09424
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118388517 (ap5b1)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
118388517 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
118388517
NCBI-ProteinID:
XP_035633580
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All DBs
Position
10:complement(32840645..32844477)
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AA seq
984 aa
AA seq
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MTIALKTSQHIVLQAIFGSTMSANWPERISAFLRSPSQFLCSTTSDIFLAEVLHELRDDR
ASDHIKVLLLSPLLEHPTLLCPSVFVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVL
LCSCCVSSHTSASQDFLDLLLQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQ
RLELLSSLRQQENSRLHQAYTGLHALALRNAVYLLTQQKGAGAGDLKTALGSNEGFVWGE
GADSAQPNSESHSDLALFSPLTLGTMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQ
AALLRRLVEVLAMVPAVSPTIFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDETF
LLKRLVGLSQHPLLSTPEKLFYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFN
DSVSMLARLNLLSLVYLEEGEEDREGQGGRGLAYLYDHLTSLLRIVENQSSREMVVTFFR
ASFLFLFHFCHVKRYSEDLSQRLCDLYLRRTRLAPHLINLSDRTQDRLEESGWAVALLRA
LQRTITEAPLSQLTLQDLRWHLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDW
RLGNSVLGVCRRLLLHPSLDSLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEK
LAGVLAQRGTERGRQAKVRSLSAIMSENEELTSGLTVHQTERPLLRLVKLDKHEPDECRP
EHKPDSEPACETESSPGQGGIEDYRAQFQSSSFASEITLQYHLTHTGVHDPHFDKLFSIR
LHFDLTDGHYEEVSDISVPCLFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHS
PLADLHVAFPEVFLPLLTPLGWAREKKQRVFEGIWGEICSGQSEGDLTNTATSLFCDQLE
ESAVGELVEKYFQRYLVSDLDKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLL
PYINSYLDDITKEIHSTQQVNGDV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgctttgaagacatcacaacacattgttttgcaggctatattcggttcaacc
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcagcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgaccacatcaaggtcctgctgctgtccccactacttgagcaccctactctgctg
tgcccctctgtctttgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccaccttctcctggccctcacctccgttctc
ctctgctcctgctgtgttagttcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcacaggctggggctgcattacacccattgagg
acaacagcctgtgactgccttagggagctagaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggccctgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaagactgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagattccgcacaaccaaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggcaccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcttagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacggcttgtggaggtgcttgccatggtgcccgcagtctccccaacg
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttcttcatacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaaaccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgacctatcagtagtggtgacgag
agcctgcccgtgctcttgacccctcggctggccgcagccctagtgcccactgtgttcaat
gatagtgtcagcatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtacgatcacctaacc
tcccttctccgtatcgtggagaaccagtccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctctttcacttctgccacgtgaagcgctactctgaggacctgtct
cagaggctgtgtgacctgtacctcagacgcactcggctggcccctcacctcatcaacctg
tctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgcttagagcc
ctgcaaagaaccatcacagaggccccgctgtcccagctcaccttgcaagacctccgctgg
cacctcaggatcctggcccgcgtggcagaggaaggggaagtcctccagagggccactctc
aactttctgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacagcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttagac
tcccttctcacaccgctggctgatctcctacagcacctcacctgccattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctttcccaggagaag
ctggctggggtgttagcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgagtgagaacgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggacaaacatgaaccagacgaatgcagacca
gagcataaaccagacagtgaaccagcctgtgagacagagagttccccaggacagggtggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacactggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgatctcacagacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgccatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcctctcctcacaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacactgcaactagcctgttctgtgatcagttggag
gagtcggctgtgggtgagctggtggagaagtactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctcttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacagaggaggatgccgtccaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagatgacattaccaaagagattcacagcacacagcaagtc
aatggtgatgtctga
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