Oncorhynchus keta (chum salmon): 118388554
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Entry
118388554 CDS
T09424
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118388554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118388554
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118388554
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118388554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
118388554
NCBI-ProteinID:
XP_035633640
LinkDB
All DBs
Position
10:complement(33779643..33785872)
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AA seq
486 aa
AA seq
DB search
MAVTPRRVRLKPWLVAQVDSGLYPGLVWIDRDNKRFRVPWKHATRHTPQHEEENTIFKAW
AVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCDIPQPL
SNPGSSDSGSWTPNDCDEDEPDTPEPLPPYPTSNGTSPTLMWSPPGSVSPLHPPSCPPSV
EVWPKEEVKPWPKEEPLDVEMQPSPEEMAPPPPLDMPSPSMPDMMFASPEMWISSLPMTD
LEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEHIAND
KQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKVKM
FCLESFLSGVIAHQRGQSASLPQFDINLCFGEEWPDSRPRERKLIMVQIIPVVARMITEM
FSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALPPGAGMSLP
QALHAQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccccacggcgtgttcggctcaagccctggctagtggcccaggtggacagt
gggctctacccaggtctggtgtggatcgatcgagacaacaagcgcttcagggtcccctgg
aaacacgctacgcgccacaccccccagcatgaggaagagaacacaatctttaaggcctgg
gcagtggagacaggaaagttccaggagggtattgatgaccctgaccctgccaagtggaaa
gcccagctccgctgtgccctcaacaagagcagagagtttaaccttgtctacgatggcacc
aaagaagttcccatgaaccccctgaagatttacgatgtctgtgacatcccacagcccctc
agtaacccaggatcctcagactctgggtcctggacgccgaatgactgtgatgaagatgaa
ccagatactccagagccccttcctccttatccaacatccaatggtaccagccccactcta
atgtggtctcctccggggtcagtatcgcccctccacccccccagctgccccccatcagtt
gaagtgtggcccaaagaggaggttaagccgtggccaaaagaggagcctttggatgtggag
atgcagccctcccctgaggagatggcgccccctcctccacttgacatgccttccccttcc
atgcctgacatgatgttcgcctccccagagatgtggatcagctccttgcccatgacagac
ctggaggtgcagttccagtaccggggtaaggaggtgtgtccagccatgacagtcagtaat
ccccagggctgcaggctgttttacggggacctgggccccatggtcaaccaggaagagctg
tttggccctatcagcttggagcagctgaggttcccctctaccgagcacatcgccaacgac
aagcagagggtcttcaccaaccgcctgctggacgtcatggaccgaggcctcatcctggag
gtcagtggccatgacatctatgccgtccgcctctgccagtgcaaggtgtactggtcaggc
ccctgtgcacccaaccccaatgcacccaacctcatagagaggcagaggaaggttaagatg
ttctgtctggagtcgtttctcagcggtgtaatagcccatcagaggggccagtcggccagc
cttcctcagttcgacatcaacctgtgctttggagaggagtggcctgacagcagacccagg
gagaggaagctcattatggtgcagatcatccctgtggtagcacgtatgatcactgagatg
ttctcaggtgactgcatgcgctcctttgacagcggcagcgtgcgcctgcagatctccatc
ccggacatcaaggacaacatcgttacccacctgaagcagctgtaccgcctgctgcagacc
caccagggccaggagggctggcctcaggctctgcccccgggggctggcatgagcctgccc
caggccctgcacgcccagtga
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