Oncorhynchus keta (chum salmon): 118388582
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Entry
118388582 CDS
T09424
Symbol
ccdc174
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118388582 (ccdc174)
03041 Spliceosome [BR:
oke03041
]
118388582 (ccdc174)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118388582 (ccdc174)
Spliceosome [BR:
oke03041
]
Complex C
Other components
EJC/TREX
118388582 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
ivWA
DUF4760
Motif
Other DBs
NCBI-GeneID:
118388582
NCBI-ProteinID:
XP_052382887
LinkDB
All DBs
Position
10:34716714..34722644
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AA seq
335 aa
AA seq
DB search
MCICHLPYCVCLPGEGDPQTAQQSSQCLADQLEGASLYPAGPGRDNEETEGLFLVDFTQK
IIDKKRENHADQDFQGKGCDPAEKDHXEDMRRELQRQVWEREEAMNSPVGRIHYEDIREQ
QDHELDVGYFTFSQDQEQRRKQXTLDMLRHQTTDQRSKREQLKENRKALLNAQLAKVRQR
KMKTKLDGTQDDQGAGPKQEEDEAHEEAPAVKKLEVEIQERRDTKSGVPHVREWDRGKVD
FFGKWTSRGQDDRESEFTPPSVYFGDDKRQGYGKWAKREQDKPKMAFMWSEGHGGGHTHP
RPSPKVVIYPSPSQVPLYPLNPQCYSLTTAQSSTP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatatgtcacttaccgtattgtgtttgtcttcctggtgaaggggaccctcaaaca
gctcagcaaagctctcaatgtctcgccgaccaactcgagggggcttccctttaccctgca
ggaccaggccgtgacaatgaggagacagagggacttttcctggtggatttcacccagaag
attattgacaagaagagagagaatcatgctgaccaagactttcagggaaaaggatgtgac
ccggctgaaaaggaccactaagaggacatgcgtagagagctgcagaggcaagtctgggag
agggaggaggccatgaacagtcctgtgggacgaatccactacgaggacatcagggagcaa
caggaccatgagctggatgtgggctactttacattttctcaggaccaggagcagcgcagg
aagcagnatactctggacatgctcagacaccagacgacagaccagcgcagtaagagggag
cagttgaaggagaacaggaaggctctgctgaacgctcagttggccaaggtgaggcaaagg
aagatgaagactaagctggacggaacacaggacgaccagggagctggacccaaacaagaa
gaggatgaagcccatgaggaggcccctgcagtgaagaagttggaggtagagatccaagag
agaagagacaccaagtcaggagtaccccacgtcagggagtgggacaggggcaaagtggac
ttttttggcaagtggacgagtcgggggcaggatgatagggagtcagagttcactcctcct
tctgtgtacttcggcgacgataagagacagggctacgggaaatgggccaaacgggagcag
gacaaacccaaaatggccttcatgtggtcagaggggcatggtggagggcatacccacccc
aggccaagcccaaaagtagttatttaccccagccccagtcaagtacccctgtaccctctc
aacccacaatgctattcattgactacagctcagagttcaacaccatag
DBGET
integrated database retrieval system
