Oncorhynchus keta (chum salmon): 118388627
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Entry
118388627 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118388627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118388627
03036 Chromosome and associated proteins [BR:
oke03036
]
118388627
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118388627
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118388627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118388627
NCBI-ProteinID:
XP_035633766
LinkDB
All DBs
Position
10:complement(36885741..36901631)
Genome browser
AA seq
1605 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFDDGQPSSSASSVGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQSDYYDVVTQPIDMMKIQQKLKMEEYDDVEQITADFQLL
FNNAKAYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYDDDDEDGDDAQNNPGGSNEDEN
APNCLKEVLEQLLDAVVTFSEPSGHLVSDLFQKLPSKVQYPDYYAIIKDPIDLKIIAQKI
QMSHYRSVGAMAKDIDLLAKNAKMYNEPGSQVFKDANTIKKVFAQRKTEIEHAEPIKSSI
RIRNRRSAQGDRLSAITMALQYDSDDDGILAGSVHYDEGESEAESMHHSMDMSNPIFQLY
EAVRGGRNSQGQLISEPFLQLPSRKDYPDYFQQISQPISLHQIRNKMKNNEYESVDQLDA
DLTLMFENAKRYNVPHSSIYKRVLKLQHIQQLKRTELLRREDDSMDGDSMLSSTMSDTGS
TKRKSHKKNTKKNRMKALYSAVTEAREMGTGRRLCELFMVKPSKKDYPDYYKIILEPVDL
RIIDHNIRSEKYMTEDALLEDMKLMFRNARHYNEEGSQVYNDANVLEKVIKDKRRDLGPT
PDDDDMSPKLKIRKSGITPKKSKYLTPLQQKLNELYEAVKNFTDKRGRRLSTIFLRLPSR
AELPNYYIAIKKPVDMEKVRSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDAL
VLHRVLLETRRDLEGGEDAHVPDVARLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAT
DPSSPDRPPLNFEIIRANVDRGRYKRLDVFQDHMFEVLEKARRMHRTDSEIFEDAVELQQ
FFIRIRDELCKNGEILLTPALSYTSKHLHSDVEKEKKEKLPKEIEEDKLKREEEKKEAEK
SEDPAGGAWQSGLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIVCIERLWQDDAGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYFNKIPVSKILGKCVVMFVKDYFKLHPEG
FRADDVYVCESRYSAKTKSFKKIKMWTMPLSSVRFVPRGVPLPVVRVASMFAPKQEEEKP
AEIQEEGKALDTMDKEREDVILDMTNGEPGCQYYEQLCYNDTWLKVGDCIYIRSHGLVRH
RVGRIEKMWMRDGAAYFFGPIFIHPEETEHEPTRMFYKKEVFLSNLEESCPMTCIIGKCA
VSSFKEYLSCRPTEVPEEDVLLCESRYIESDKQMKKFKGLKRFSLSGKVVEDEIYYFRKL
IVPQKEPSPLLDRKIAVLEAKFADMTDEELEDLGEDDGELGDTSIPQLQSPMAGSDMDMP
YTPPQSTPKSMKGMSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEW
RNLESPKKAEYEERAAKVAEQQERERAAQQLAFPRAGMMGSYMPHMMLQDLVDGMFSMTG
MPPHHMMLPLLPHHHLMPGIPGFPGMPYPGVNAGAPGAYGTQMIGLGQQAPPPYPGQGQP
ALQQPSTPIFVAPPPKPQRLLHSEAYLKYIEGLNAESSTISKWDQTLSARKKDVRLTKEQ
ESRLPSHWLKSKGAHSTMADALWRLRDLMLRDTMNIRQTYNLXNV
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaaaaggagaagggctacgtccccctctagtagtgtcagtgggggggacttt
gacgatggacagccttcatcctcagcatcttcggtaggtcggaaaaggagaagaacctca
aatattcccactgttgatccaattgcagtatgccatgaattgtacaacacaatcagagat
tataaggatgaccagggaagaatgttatgtgagctgttcataagagcacccaagagacga
aatcaatcggattactatgacgttgtgactcagcctattgacatgatgaagatccagcag
aagctgaagatggaggagtacgatgatgtggagcagataacggctgactttcagctctta
ttcaacaatgcaaaggcatactacaagtcggattctccagagtacagagcagcctgtaag
ctgtgggacctctacctgcgtactaagaatgagtttgttcagcggggggattatgatgac
gatgatgaggacggggacgatgcacaaaataatcctggagggtcaaatgaggatgagaat
gcacccaattgcctgaaggaggtccttgagcagctgctggatgctgtggtgacattctcc
gagccctcagggcatctcgtcagtgatctattccagaaactgccctctaaagtgcaatac
ccagactattatgctataataaaggacccaatagatctgaaaatcattgcccagaagata
cagatgagccactacagaagtgttggtgccatggcaaaagacatagatcttctggctaag
aatgccaaaatgtacaatgagcctgggtcacaagtttttaaggatgccaacaccatcaaa
aaggtatttgcacagagaaagacagaaattgagcatgctgagccaatcaagtccagtatt
cgcatcaggaacagaaggtcagcccagggagaccggctctcagctattaccatggctctt
cagtatgatagtgatgacgatggcattctggctgggtctgtccactatgacgagggggag
tcagaggcagagagcatgcaccacagcatggacatgagtaaccccatcttccagctgtac
gaggctgtgcgtggcggcaggaacagccagggccaactcatctccgagcccttcctccag
ctgccctccaggaaagactacccagactacttccagcagatcagccagcccatctccctg
caccagattaggaacaagatgaagaacaacgagtatgagagtgttgatcagctagacgcc
gacctcactctgatgtttgagaacgccaagcgctacaatgtgcctcattcctctatctat
aagcgtgtgttgaaactccagcacattcagcagctaaagagaacagagctattgaggagg
gaggacgacagcatggatggggacagcatgctctcttctaccatgtctgatactggcagc
actaagaggaagagccataagaaaaacaccaagaagaaccggatgaaggccctgtactcc
gcagtgacggaggcccgggagatgggcacaggccggaggctctgtgagctcttcatggtc
aagccttccaagaaggactacccggactactacaagatcatcctggagccagtggacctg
aggatcatcgaccacaacatccgctctgagaaatacatgactgaggacgctctgctggag
gacatgaagctcatgttccgcaacgcacgacactacaatgaggagggctcacaggtctat
aacgatgccaacgtcctggagaaagtcataaaagacaaacggagggatcttggcccaacg
cctgacgatgatgacatgtcaccaaagttgaaaataaggaagagtggtatcacgcctaag
aagtccaagtacctgacccccctgcagcagaagctgaacgagttgtacgaggcggtgaag
aacttcacagacaagcgtggtcgccgcctcagcaccatcttcctacggcttccatcgcgc
gctgaactgcccaactactacatcgccatcaagaagccagtggacatggaaaaggtcagg
agccacatgctggccaacaagtaccaggatgtagacgcactggtggaggacctggtgctg
atgttcaacaacgcctgcacctacaacgagccagagtctctgatctaccgcgacgctctt
gtgctgcaccgtgttctgctggagactcgccgggatctggagggaggcgaggatgcccat
gtgcccgacgtggcccgcctcatccaggagctcatccgcagcctcttcgtctccgtgctt
ggtcaccaggatgacgaggggcgttgttacagcgactcgctggctgagatccccgctact
gaccccagcagccccgacagaccgccgctcaactttgagatcatcagagctaacgtggac
cggggacgctacaagagactggacgtgttccaggatcacatgtttgaggtgctagagaag
gccaggcgcatgcacaggacggactctgagatctttgaggatgcggtggagctgcagcag
ttcttcatccggatccgagatgagctgtgtaagaatggagagatcctgctcacccccgcc
ctcagctacacctccaaacacctgcacagtgacgtggagaaggagaagaaggagaagctg
cccaaggagatagaggaggacaagctcaagagggaggaggagaagaaagaagctgagaag
agtgaggaccctgctggaggggcgtggcagtctggtctccagcgtacctacagccaggac
tgcagcttcaaagacagcatgtaccacgtgggagactatgtgtacgtggagcctgctgag
cccaacctgcagccgcatatcgtctgcattgagcgcctgtggcaggatgatgcaggtgag
aagtggctgtatggctgctggttctacaggccgaatgaaaccttccatctcgctacacgc
aagttcctggagaaggaggtcttcaagagcgactacttcaacaagattcctgtcagcaag
atactgggcaaatgtgttgtcatgtttgttaaggactactttaagcttcacccagagggc
ttcagggcagacgatgtgtatgtctgtgagtctcgctactcagccaagaccaagtccttc
aagaagatcaagatgtggaccatgcccctgagctccgttaggtttgtccctcggggcgta
ccgttgcctgtagtccgggttgcatccatgtttgcccctaaacaagaagaagagaagcct
gcagagatacaagaagagggcaaagccttggacactatggataaggagagggaggatgta
atcctggacatgaccaatggggagccaggctgccaatactatgagcagctctgctacaat
gacacctggctgaaagtgggagactgcatctatattcgctcacatggactagtgcgccac
cgagtaggcagaattgagaagatgtggatgcgggacggagcggcctacttctttgggcct
attttcatccacccagaggagacagaacacgagcccaccaggatgttctacaagaaggaa
gtgttccttagcaacctggaggagtcttgccccatgacctgtatcatagggaagtgtgcg
gtgtcctccttcaaggagtacctttcgtgccggcccacggaagtgcctgaggaggacgtt
ctgctttgtgagagtcgttacatcgagagtgacaaacagatgaagaagttcaagggtctg
aagcgcttctccctctctgggaaggtggtggaggacgagatctattacttcaggaagctg
attgtgccccagaaggagccatcccctctgctggacaggaagatcgcagtgctggaggcc
aagtttgccgacatgacagatgaggagttggaggacctgggggaggatgatggggagctg
ggagacacctccataccccagctccagagccccatggcaggcagcgacatggacatgcct
tacacccctccacagtccactcccaagtccatgaaggggatgtccaagaaggagggctcc
aagaggaagatcaacatgagtggctacatcctgttcagcagtgagatgcgagcggtcatc
aaggcccaacacccagacttctccttcggggaactcagccgtctggtgggcaccgagtgg
aggaacctggagtctcccaagaaagctgagtatgaggagcgagcagctaaagtggccgag
cagcaggagcgggagagggctgcccagcagctggctttccctagagcaggcatgatgggt
tcatatatgccacacatgatgctgcaggacctagttgacggcatgtttagtatgactggc
atgccaccacatcacatgatgttgcctctcttgccccatcatcacctaatgccaggcatc
cctgggttccctggcatgccatacccgggtgtcaacgcgggtgcccctggagcctatgga
acccagatgattggtcttgggcagcaggccccgccaccctatccaggacagggccagcct
gccctccagcagccctcaacacccatatttgtagccccgccacccaagccccagcgcctg
ctccattcggaggcgtacctgaagtacattgagggactcaatgcagagtcctccaccatc
agcaagtgggaccaaactctctcagctcgaaagaaagatgtgcggctgaccaaagagcag
gagagccggctgccgtcccattggctgaagagcaagggcgcccattccaccatggcggac
gcattgtggcgtctgcgagacttgatgctgcgtgacacaatgaacatccgccagacgtac
aacctgtagaatgtctga
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integrated database retrieval system
