Oncorhynchus keta (chum salmon): 118388634
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Entry
118388634 CDS
T09424
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118388634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118388634
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118388634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
FraC
IQ
Neur_chan_memb
GPHH
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
118388634
NCBI-ProteinID:
XP_035633786
LinkDB
All DBs
Position
10:37116361..37223401
Genome browser
AA seq
1844 aa
AA seq
DB search
MIIMSTILTNCVFMTFSDPPEWNKIVEYTFTGIYTFESLTKIVARGFCIDGFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALVQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENFLANGSKGFDWNEYIMSERNFYFI
PGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLTLFRLMTQDFWENL
YMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATIEEAEQKEAEFKAM
LEQIKNQQEDAQAAAMATSAGMVSEADGVEGGDATEGGGHLSRSSSDASKLSSKSAKDRR
NRKKKSRQKEEEKKEKGEKGEKVDHEKHVKSESDDGSRRSIFRFPGNRLGRKSSIMNQSL
LSIPGSPFMSRHNSRSSIFSFNKGRPPKDVGSENEFADDEHSTVEESEDRRGSLFIPYRR
SSYSGYSQGSSRLINPLAPHIGGKRNSTVDCNGVVSLIAHQPGGSLLPETTDVEGKKKHS
GSLMVSVDQLSRNKDRTNSVMSVATHTHSHTLLEELEDSQRACPSWWYKFANLFCVWDCF
PFWLKIKYVLNLIVMDPFVDLAVTICIVLNTLFMAMEHYPMTPRFDETLSVGNLVFTGIF
AGEMFAKLAAMDPYYYFQEGWNCFDSFIVTLSLVELVLADIEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIHSSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIAISCKLPR
WHMNDFFHSFLMVFRVLCGEWIESMWDCMEVAGQNMCMIVFLMVMVIGNLVVLNLFLALL
LSSFSADNLAPSDDDGEQNNLQIAVGRIKTGIAWAKVFVAEVMKKEEEEAEDEQKHLDEF
DEKLNCIANQKGIDINRELDYINGNTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVG
ESDFDNLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDVEEVVVVEVVEEFLDPDACW
TDECVAKYTFLYLPIDHGWGKHWWFLRKTSYLIVEHNWFETVIIFMILLSSGALAFEDVY
INKRKTIKIILEYADSVFTYIFILEMVLKWVAYGWVKYFTNAWCWLDFFIVDVSIITLIA
NAMGYSDLGPVKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIF
SIMGVNLFAGKYYYCFNETSEENFKPDVVNNKTECFALINANYSEVRWKNVKINFDNVAA
GYLALLQVATFKGWMDIMYAAIDSRKVEDQPIYEDNIYMYIYFVAFIIFGSFFTLNLFIG
VIIDNFNQQKKKFGGQDIFMTEEQKKYHTAMKKLGSKKPQKPIPRPLNNFQGLVFDFVTQ
QVFDISIMMLICLNMVTMMVETDDQSEETDNILYWVNFVFIVIFTTEFVLKLFALRHYYF
TIGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLL
FALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMICLFMI
TTSAGWDGLLLPILNYPPDCDPQLENPGAPNTGDCGNPSVGIFFFVMYIIVSFLIVVNMY
IAIILENFGVATEESADPLSEDDFTTFYEIWEKFDPDASQFITYGKLGDFADYLEHPLRV
PKPNTIELISMDLPMVSGDRIHCLDILFAFTKRVLGDTGELDMLRDQMEQRFIAANPSKV
SYEPITTTLRRKQEDVSAKIIQQAYRNYLARRGFKRKRRPASNNNVKNGGTNPEKEKKEG
TPSTASLPSYDSVTKPDKEKQDENEGKGGKKEARNQKAVRESKC
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcatgagcaccattttgaccaactgtgttttcatgacgtttagtgatcctcca
gaatggaacaagatagtagagtacaccttcacaggtatctacaccttcgaatcgcttacc
aagattgtggcgcgaggcttttgtatagacgggttcacttttctacgagatccatggaac
tggctggacttcatggtaatctctatggcatatgtaacagaatttgtggacctggggaat
gtctcggcgctgagaacgttcagggttctccgagcattgaaaactatttcagtcattcca
ggactcaagaccatcgtcggtgctctagttcaatcggtgaagaaattgtcagacgttatg
atcctcacggtcttctgtctcagtgtcttcgccttgattggactacagctcttcatgggc
aacctgcggcagaaatgtgtcatctggccaatcaactccactgagaacttcctggccaat
ggcagtaagggcttcgactggaacgaatacatcatgagcgagaggaatttctatttcatt
cctgggcagctggatgctctactgtgtggaaacagctcggactcagggcggtgccctgag
ggctacacgtgtatgaaggccgggagaaacccaaactacgggtacactagctttgacagc
ttcggctgggccttcctcactctcttccgcctcatgacccaagacttctgggagaacctc
tacatgctgacactgcgagcggcagggaaaacctacatgattttctttgtgttggtgatc
ttcgttggatccttctacctggttaatctgattctggctgtggtggccatggcctatgag
gaacagaaccaggcgacgatagaggaggccgagcagaaagaggccgagttcaaagccatg
ctggagcagatcaagaaccagcaagaggatgcacaggctgctgccatggcgacctcggcg
ggcatggtgtcggaggccgacggggtggaggggggcgatgcaacggagggtggaggtcac
ctatcccgtagctcctctgatgcatccaagctcagctccaagagcgccaaggatcgacgc
aatcgcaagaagaagtctcgtcagaaagaggaggagaagaaagagaagggggagaaaggc
gagaaggtcgaccacgagaagcacgttaagtccgagtcggacgatggcagcaggaggagc
atcttccgtttcccaggcaaccggctgggacgcaagtcgtccatcatgaaccagtctctc
ctctccatcccgggctcgcccttcatgtcgcgccacaacagccgcagcagcatcttcagc
ttcaacaagggccgcccacccaaggacgtgggctcggagaacgagtttgccgacgacgag
cacagcacggtggaggagagcgaggaccgccggggctccctgttcatcccctaccgccgc
agcagctacagcggctacagccagggctcgtcgcgcctcatcaacccactagcgccccac
attggagggaagaggaacagcacggtggactgcaatggcgtagtgtcactcatcgctcac
cagcccggcgggagccttctgcctgagaccacagatgtggaggggaagaagaaacactcg
ggctccctgatggtctctgtggaccagctcagccgcaacaaggaccggaccaacagtgtg
atgagcgtggcgacacatacacactcacatactctgctggaggagctagaagattctcaa
agggcatgtccatcatggtggtataagtttgccaacctcttctgtgtgtgggactgcttt
cccttctggctgaagatcaagtatgtgctcaacctgatcgtcatggacccttttgtagat
ctggccgtcaccatctgtatcgtcctcaacaccctcttcatggccatggagcactacccc
atgactcctcgctttgatgagacgctgtcagtgggcaatctggttttcactggtatcttt
gctggtgagatgtttgccaagctggctgccatggatccatactactacttccaggaaggc
tggaattgttttgacagcttcatcgtgaccctcagtttagtcgagctggtattggctgac
attgagggtctgtctgtgctcaggtcattccgattgctgagagtgtttaagctggccaag
tcgtggcccacactcaacatgctcatcaaaatcattcactcttctgtgggagccctggga
aacttgaccttggtgctggccctcattgtcttcatcttcgccgtggttggcatgcaactg
tttggaaagaactacaaggactgtgtttgtaagatcgcaataagctgtaagctgccccgt
tggcacatgaatgacttctttcactcatttctcatggtgtttcgggttctgtgcggggag
tggatcgagtccatgtgggactgcatggaggtggccggccagaacatgtgcatgatcgtc
ttcttgatggtcatggtcataggcaacttggtggtgttgaacctgttccttgccttgttg
ctgagctcgttcagcgcagacaacctggcaccctcagacgatgacggagaacagaacaac
ctgcaaatagccgtcggtcgaataaagacggggattgcctgggccaaggtctttgtagcc
gaggttatgaagaaggaggaggaagaagcagaggatgagcagaagcatcttgatgagttt
gacgagaagcttaactgcattgcgaaccagaagggcatagacatcaaccgcgagctggac
tacatcaatggcaataccagtggtattggcagcagcgtgggcaagtacatgatcgacgag
gaccacatgtccttcatccacaatcccaacctgaccgtgtgtgttcccattgcggtcggg
gagtcagatttcgataacctcaacaccgaggacttcagcagcgagtcggatgtggagaac
agcaaagacctggatgacactagctcttcggagggcagcaccatagacatcaagcctgac
gtggaggaagtggtggtggtggaggttgtggaggagttcctggacccagacgcctgctgg
acagatgaatgtgttgccaagtatacgtttttgtacttgcccatcgatcatggctggggg
aagcactggtggttcctgagaaagacaagctacctgattgtggagcacaactggtttgag
accgtcatcatcttcatgatccttctcagtagcggggcgttggcctttgaggatgtgtac
ataaataagaggaagaccattaagattatcctggagtacgcagacagcgtgttcacctat
atcttcatcctggagatggtgctcaaatgggtggcctatggctgggttaaatacttcacc
aacgcctggtgttggctggacttcttcattgtggatgtgtctataatcactcttatagct
aatgcgatgggctactccgatctagggcccgttaaatcactacggacattgagggcattg
aggccccttagggccctgtctcgttttgaagggatgagggtggtggtgaatgccttggtg
ggagccatcccctccatcatgaacgtgctgctggtgtgcctcatcttctggctcatcttc
agtatcatgggggtcaacctgtttgcagggaagtattattactgcttcaacgagacctca
gaggagaactttaaaccggacgtcgtcaacaacaagacagagtgctttgcactaatcaac
gcaaattacagtgaggtcaggtggaagaatgtcaagattaactttgacaatgtggctgca
ggatacctggcacttctacaagtggccacgtttaaaggctggatggacataatgtatgct
gccattgattctcggaaggtggaggatcagccgatctatgaagacaacatctacatgtat
atctactttgttgccttcatcatctttggctctttctttaccctcaatctcttcattggt
gtcatcattgacaactttaaccagcaaaagaaaaagtttggaggtcaggatatattcatg
acagaggagcagaagaaataccacactgccatgaaaaaacttggctcaaaaaaaccacaa
aaacctataccaagaccattgaataactttcagggcctggtatttgacttcgtaacgcag
caagtgtttgatatatctattatgatgttgatctgcctcaacatggtgaccatgatggtg
gagacggacgatcagtcagaagaaactgacaacatcctctactgggtcaactttgtcttt
attgttatttttactactgagtttgtgttaaagctctttgcccttcggcactactacttc
accattgggtggaacatctttgacgtggtcgtggtcattctctcaattgttggcatgttc
ctcgcagatatcattgagaagtactttgtctctccaaccctcttcagggtgatccgactg
gcccgaatcggcagaatcctgcgtctgatcaaaggggccaagggcattcggactttactg
tttgctctgatgatgtcacttcctgccctgttcaacatcgggttgttactcttcctggtt
atgttcatcttctctatctttggcatgtctaactttggctatgtcaagcatggggcagga
atcgacgacatgtacaactttgagacatttggcaacagcatgatctgcctgtttatgatc
accacatctgccggctgggacggtttgttgttacccatcctcaactacccacctgactgt
gacccacaactggagaacccaggtgcaccaaatacgggtgactgtggcaacccctcggtt
gggattttcttttttgtcatgtatattatcgtctccttcctaatcgtcgtcaacatgtac
attgccattatccttgagaacttcggcgttgcgactgaagagagtgccgacccgctcagc
gaagacgacttcacgaccttctacgaaatatgggagaagttcgacccagacgcctcgcag
ttcatcacctatggcaagcttggagactttgcagactacctcgagcacccgctccgtgtt
ccaaagcccaacaccatcgagctgatctccatggacttgcccatggtgagcggggaccgg
atccactgcctcgacattctgtttgcattcaccaaacgggtactaggcgataccggagag
ctggacatgctaagggatcaaatggaacaacgctttattgcggcgaacccgtccaaagtg
tcttatgagcctattactactactctgaggcgcaagcaggaggacgtgtcggccaaaatc
atacagcaggcctaccgaaactacctggctagacgcggcttcaaacgcaagcgcagacct
gccagtaacaataatgtgaagaatggggggacgaatccggaaaaggaaaagaaggagggc
acgccctccactgcctctctcccctcctatgacagtgtaaccaaacctgacaaggaaaaa
caggatgagaacgaaggaaagggagggaagaaggaggccagaaaccaaaaagccgtcagg
gaatctaagtgttag
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integrated database retrieval system
