KEGG   Oncorhynchus keta (chum salmon): 118388656
Entry
118388656         CDS       T09424                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118388656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118388656
   03041 Spliceosome [BR:oke03041]
    118388656
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118388656
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118388656
Spliceosome [BR:oke03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    118388656
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 118388656
NCBI-ProteinID: XP_035633824
LinkDB
Position
10:38615233..38622359
AA seq 376 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGGYGDNDGYNNYGGNGGGYGGGPGGYGG
GNRGYGGGGGGGGYGNQGGSYGGGGGYDNYNNGGGGGGGGGSYRGGNYGASSGGGSSSGS
GGGGGGGGDYNDFGNYNSQSSSSYGPMKGGSGYSGGSGGGRSSNPYGGGGGGVGGGGGYG
GGSGGGYGGGSGGRRF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagactaccgacgagagtttgcggacccattttgaaagatggggatccctaaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgatgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtttccagagaggattcctcaaggccaggtgctcac
acgactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagatcgaagtcatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggtgga
tatggaggtggttttggtggagggagaggaggaggtggaggatatggtgataacgatgga
tacaataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatggtggt
ggcaaccggggctatggcggaggcggcggcggtggtggttatggtaaccagggtggcagc
tatggaggaggaggaggatacgacaactacaacaatggaggtggtggtggtggtggtggt
ggaagctacagaggtggtaactacggagctagtagtggtggtgggagcagcagtggaagt
ggtggtggtggtggtggtggtggagactacaatgactttggcaattacaacagccagtcg
tcctccagctacggcccaatgaaaggaggcagcggctatagtggcggcagtggagggggc
cggagcagcaacccatatggtggtggtggtggtggtgttggtggtggtggtggttacgga
ggaggctccggtggtggatatggagggggctccggagggcgaaggttctag

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