Oncorhynchus keta (chum salmon): 118388786
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Entry
118388786 CDS
T09424
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118388786
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118388786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118388786
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
SR proteins
118388786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118388786
NCBI-ProteinID:
XP_035634151
LinkDB
All DBs
Position
10:complement(42513402..42521590)
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AA seq
172 aa
AA seq
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MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSPSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTTERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccccctg
cgtagtgtgtgggtggcgaggaaccccccaggctttgcctttgtcgagtttgaggacccc
agagatgcaactgatgctgtgagagaattggatgggaggactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacccccaccctcctgg
agccgtcgccctggacgtgatgactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctccgtcacgagac
aggaggagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctctaggaccacggagagaaagtga
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