Oncorhynchus keta (chum salmon): 118388800
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Entry
118388800 CDS
T09424
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118388800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118388800
03036 Chromosome and associated proteins [BR:
oke03036
]
118388800
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118388800
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118388800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118388800
NCBI-ProteinID:
XP_035634167
LinkDB
All DBs
Position
10:complement(43124175..43162275)
Genome browser
AA seq
1640 aa
AA seq
DB search
MSSKRRRATSPSSSSVSGGDFDDASSTPGSGRKRRRPSNVPTVDPIAVCHEVYNTVRDHK
DDQGRLLCELFIRVPKRRKQPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMFN
NAKTYYKAEGVEYQEACRLWELYVHTRNEFVQPGDGDEDDDDGEDILDNRALFTEDETPP
SCLKEVLEQLLDAVVSYTDPSGRVISELFQKLPSKVHYPDYYAVIKEPLDLRAITQRIQI
GYYKSVTGMAKDVDLLVKNAKTYNEPGSQVFKDANIIKKVFIQRKTEIDHAEPTKTSVRI
KNRRSAQGDRLSAITLALQYGSENDEDALLSGSVHYDEGESEAECLSSSMDMGNPVFQLY
EAVRGGRNSQGPLLSEPFLQLPSRKEYPDYYQQIKHPIALQQIREKMKNGEYESVEQMDS
DLTLMFENAKCYNVPTSSISKRALRLQQILLLKKRELLRRGDEEEQDSILSSDTGTGSAT
KRKSHKKNMKNRMKALYAAVTEAREPGTNRRLCDLFMVKPSKKDYADYYKVILEPMDLKT
IEHNVRSKRYATEEALMDDMRLMFRNARHYNEEGSQVYNDAGILEKIVKDKRKELGASPE
EDTDNMGSPKLKLRKSGVSPKKSNKCLTPLQQRLNELYDAVRNYTDARGRRISTIFLRLP
SRAELPDYYATIKRPIDMERLRSHMAGGRYQDVDALVEDFAVMFNNACTYNEPESLIYRD
ALLLHRVLLDTRRLQEGGEEGGGSPPAVGPVVMELIRNLFVSVLAHQDEEGRCYSDSLAE
IPAQDPTSPENPPLNFDVIRANIDRGRYRRLDVFQEHMFNVLEKARRLHRTDSEIFEDAV
ELQQFFIKIRDELCKNGEILLSPALSYTSKHLHNDVEQEKREKLPKEIEEDKLKKEEENK
EDGEKAEDPAGGGAGPERTYRQDCSFENRTYHVGDCVYVQPAEANLKPHIVCIERLWEDE
AGEKWLYGCWFYRPSETFHLATRKFLKQEVFKSDYFNKVPVSKILAKCMVMFVKDYFKLQ
PEGVRPEDVYVCESRYSARNKAFKKIKMWAGPAGVRFVPRDVPLPVIRVASMYAKRDQEK
LLAVADNGSHSIVDKELEDVPVEMSGGEPGCQYYDQLHYNNMWLKVGDCVYVQSHGLVKP
RVGRIEKLWVRDGAAFFFGPIFIHPEETGHEPTRMFYKREVFLSNVEEACPMTCVIGKCV
VSSFKDYLSCRPTEVSEEDVFLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEVYYFRKL
IVPQKEPSPLLNKKIEELELKLADMDEGDEDLDDLEDEDEAPETPSMPTIQTPLASDLDV
MPYTPPPQSTPKAKGVSKKEGAKRKVNMSGYILFSSEMRSVIKTRHPDFSFGELSRLVGT
EWRNLEAPKKVEYEERAARVVERQEKERAAQQQASPRAGTPVGSMMGVVPSPSHMGMMPG
PGMMGAYGPPYGMPMQGPHEGLLGMGPMPPHHMGPMPPQHLQPGMPGYHPGMPYPGMMGP
GMNGMQGSPGGHYYMQQPGMFSPGQQAPPPYPGQLGQPSHLQPMTPMFVAPPPKTQRVLH
SEAYLKYIEGLNAETDTVSKWDQSLKARRRDAHLSKDQESRLPSHWLKSKGAHKTMADAL
WRLRDLMLRDSLNIRQAYNM
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaaaaggagaagggccacctctccatccagtagtagtgtgagcggaggggac
tttgacgatgcctcctccactcctggaagcgggcgaaagaggagaagaccctctaatgtc
cctacggtagatcctattgctgtgtgccatgaggtgtacaacactgtcagggaccacaag
gacgaccagggaagactgctttgtgagctgtttatcagggtaccaaagagaaggaaacag
ccagactactatgaggtggtgtcccagcccatagacatgaccaagatccagcagaagctc
aagtcagaggactaccaagatgtggagcagctcactgctgatttccagctcatgttcaac
aacgccaagacctactataaggctgagggtgtggagtaccaagaggcctgcaggctgtgg
gaactctatgtccacaccaggaatgagtttgttcagccaggggatggtgatgaagatgac
gacgatggtgaagacatcctagataatcgtgctctcttcactgaagatgagaccccaccg
agctgcctgaaggaggttttggagcagctgctagatgctgtagtgtcatacacggacccc
tcaggaagggtcatcagtgagctcttccagaagctgccttccaaagtgcactacccagac
tactatgccgttatcaaggagccccttgatctgagagccatcactcagagaatacagatc
ggatactacaaaagtgtcaccggcatggctaaggatgttgaccttctagtgaaaaatgca
aaaacatacaatgaaccaggatctcaggtttttaaggatgctaacatcatcaagaaggtc
ttcatccagagaaagactgagatagaccatgctgagcccactaagaccagtgtccgcatc
aagaaccggaggtcagcccagggagaccgtttatctgccatcaccctggctttgcagtac
ggctcagagaatgacgaggacgccctgctctctggctctgtgcattatgacgagggtgag
tctgaggcggagtgcctgagctccagtatggacatgggtaacccagtgttccagctgtac
gaggctgtgagggggggcaggaacagccagggtccgctcctttctgaacccttcctccag
ctgccctccaggaaagaataccctgactactaccagcagatcaaacaccccatcgccctg
cagcagatcagggagaagatgaagaatggggagtatgagagtgtggagcagatggactct
gaccttactctgatgtttgagaatgccaagtgttacaacgtgcccacctcaagcatctcc
aaacgggccctccggctgcagcagatcctgctgcttaagaagagggagcttttgaggaga
ggtgacgaagaggaacaggacagcattctgtcctctgacacaggaaccggcagtgccacc
aagaggaaaagccataagaagaacatgaagaaccgtatgaaggcactgtatgctgcagtg
actgaagccagagagccagggaccaaccggaggctctgtgatctgttcatggtcaagccc
tccaagaaggattacgcagactactacaaggtgatcctggagcccatggaccttaagacc
atcgagcacaacgtccgctcaaagcgctacgccaccgaagaagccctgatggacgacatg
aggctgatgttccgcaatgcacgtcactacaacgaggagggatctcaggtttataatgac
gctggcatcctggagaagatagtgaaggacaagaggaaggagctaggagcttctcccgag
gaggacactgacaacatgggatctcctaagcttaaactaaggaagagtggtgtgtctcct
aagaagtccaataagtgcctgacccccctgcagcagcgcctcaacgagctgtatgacgct
gtgaggaactacacagacgccagggggcgacgtatctccaccatcttcctgcgcctgccc
tcccgtgccgagctgcctgactactacgccaccatcaagaggcccatcgacatggagcgc
ctgcgcagccacatggcgggaggccgataccaggacgtggatgctctggtggaagacttt
gcagtgatgttcaacaacgcctgtacctacaacgagccagagtccctgatctaccgtgac
gctctgctcctccaccgcgtgctcctggatacccggcggctgcaggagggaggggaggag
gggggcggctctccccctgctgtagggccagtggtcatggaactgatcaggaacctgttt
gtgtctgtgctggcgcaccaggacgaggaggggaggtgttacagcgactcactggctgag
atccctgcccaggacccgactagcccggagaaccctccgctcaacttcgacgtgatccgg
gccaacatagaccgaggacgctaccgcaggctggacgtgttccaggagcacatgttcaat
gtgctggagaaggccaggcgcctgcacaggacggactctgagatctttgaggatgcggtg
gagctgcagcagttctttataaagatccgggatgagctgtgtaagaacggggagatcctc
ctctcccctgcgctcagctacacctccaaacacctgcacaatgacgtggagcaggaaaag
agagagaaactacctaaggagatagaggaggacaaactgaagaaggaggaggagaacaaa
gaggatggagagaaggctgaggacccagctgggggaggtgcggggccagagaggacatac
cgtcaggactgcagctttgagaacagaacctaccacgtgggtgactgtgtctacgtgcag
ccagccgaggccaacctcaagcctcacatcgtctgcatcgagcgcctgtgggaggatgaa
gcaggtgagaagtggctgtatggctgttggttctacaggcctagtgagacctttcatcta
gccacacgcaagttcctcaagcaagaggtcttcaagagtgactacttcaacaaagtacca
gtcagcaagatactggcaaaatgcatggtcatgtttgtcaaggattacttcaagcttcag
cctgagggagtaagaccagaggacgtgtacgtctgtgagtcccgttactctgccaggaac
aaggccttcaagaaaatcaagatgtgggccgggccagccggcgtgaggtttgtccctcgg
gatgtgccgttgcccgttatccgggtggcctccatgtatgccaaacgtgatcaggagaaa
ctgttggccgtggccgataacggcagccacagcatcgtcgacaaggagcttgaggatgtc
ccggtagagatgagtggaggggagccaggctgtcagtactacgaccagctccactacaac
aacatgtggctgaaggtgggagactgtgtctacgtccagtcacatgggctcgttaaaccc
cgtgtcggcaggatagagaagctgtgggtgcgcgacggcgcagcatttttcttcggaccc
atcttcatacacccagaggagacgggacacgagcccaccaggatgttctacaagagagag
gtgttcctcagcaacgtggaggaggcctgccccatgacctgcgtcataggtaaatgtgtg
gtgtcgtcctttaaggactacctgtcgtgtcggcccactgaggtgtctgaggaggacgtg
tttctgtgtgagagccgttacattgagagtgagaagcagatgaagaagtttaagggcctg
aagcgcttctccctccacgctaaggtggtggacgacgaggtctactacttcaggaagttg
atagtgccccagaaggagccgtctcctctgctgaataagaagattgaggagctggaactg
aaactggcagacatggatgagggggatgaggatctggatgacctggaggatgaagacgag
gctccagagaccccctccatgcccaccattcagacccctctggcaagcgatttggacgtc
atgccttatacccctcctccccagtccactcccaaggcgaagggcgtttctaagaaggaa
ggagccaagaggaaggtcaacatgagtggttatatcctattcagcagtgagatgcgttcg
gtcatcaagacccgccaccctgatttctccttcggggagctcagccgtctggtgggcacc
gagtggaggaacctggaggctcccaagaaagtagagtatgaagagcgggcagccagggtg
gtggagcggcaggagaaggagagggcagcccagcagcaagcatccccgagagcaggtacc
ccagtagggtccatgatgggagtggtgccttcgcctagccacatgggaatgatgcctggt
ccaggcatgatgggagcttacggccccccctacggcatgcccatgcagggcccccatgag
ggcttgctgggtatgggcccaatgccacctcaccatatgggcccgatgcccccccaacac
ctccagccaggtatgcctgggtaccaccctggcatgccctacccgggtatgatgggtcct
ggtatgaatggcatgcaaggaagtcccggaggccactactacatgcaacagcctgggatg
tttagcccggggcagcaggctcctccaccctacccaggccagctaggccagccctctcac
ctccagcccatgactcccatgtttgtggctccaccgcccaagacacagagggtgcttcac
tctgaggcctacctcaagtacatcgagggcttgaacgcagagaccgacacagtcagcaag
tgggaccaatctctcaaagcgcgtcggagagatgcccacctgtccaaagaccaggagagc
aggctcccttcccattggctgaagagcaagggagcccacaagacgatggcagatgcactg
tggcgcctgcgggacctgatgcttcgagactcactgaacatacggcaggcgtacaacatg
taa
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integrated database retrieval system
