Oncorhynchus keta (chum salmon): 118388837
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Entry
118388837 CDS
T09424
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118388837 (rbbp5)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118388837 (rbbp5)
COMPASS/SET1 complex (yeast)
118388837 (rbbp5)
MLL-HCF complex
118388837 (rbbp5)
MLL3/MLL4 complex
118388837 (rbbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
Beta-prop_LRRK2
Beta-prop_SCAP
WDR54
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_Vps41
Frtz
Motif
Other DBs
NCBI-GeneID:
118388837
NCBI-ProteinID:
XP_035634243
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Position
10:complement(45917587..45925761)
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AA seq
561 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSLWDVLTGDCDQRFRFPSPILKLQYHPRDL
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
DTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIVAFCSSDEELEDFKALLYLPIAPEVEDPEENPFGPPP
DAAGQTTPVEDGSAHTGSGDKKRQPSSEGVPPKKKARTTTIELQGVPSDEVHPLLGVKGD
SKSKKKTAGRPKGSKGKEKDFPFRPKPYRGDRVYPDGAVAGGGAGGGGGGGGMKGRAEGG
LTAAGSLVSQSYKQHDIGGLD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagagttgctcgagtcgttcgggcagaactatccagaggaggccgatggcact
ctggactgtatcagtatggctctcacatgcacctttaaccgctggggtacgcttctggcg
gtgggctgcaacgacggacgcatcgtcatctgggacttcctgacacggggcatcgccaag
atcatcagcgctcacattcatccagtctgctcactgtgttggagtcgagatggtcacaag
ctggtgagtgcgtctacagataacatagtgtccctatgggatgtcctgacgggagactgt
gaccagaggttccgcttcccctcgcccatcctcaaactgcagtaccaccccagagacctt
gacaaagtcctggtgtgtcctatgaagtccgctcctgtgctgctgaccctgtccgactct
aaacacgtggttctgcccgtggatgacgactctgacctgaatgtggtggcggccttcgac
cggcggggagagtacatctacaccggcaacgccaaaggaaagattctggtgctgaacacg
gacacacaggatctggtggcatcgtttcgggtgacgacagggaccagtaataccacagcc
atcaagtccatagagtttgcgcgcaagggcagttgtttcctcatcaacacagcagacaga
atcatcagggtgtatgacgggagggagattctcacatgtgggagagacggggagccagag
cccatgcagaaactacaggaccttgtcaacaggactccctggaagcggtgttgtttctct
ggggatggggagtacattgtggccggttcagcccggcagcatgctctatacatctgggag
aagagcattggcaacttggtgaagatcctccatggaaccagaggagaactactgctggac
gtggcttggcaccctgtgcggccaatcatcgcctccatatccagcggagtggtgtccatc
tgggctcagaaccaagtggaaaactggagtgcgttcgccccagacttcaaggagctggat
gagaacgtggagtacgaggagagagagtctgagtttgacatagaggatgaggataagagt
gaacctgaacaaacaggtgctgatgctgcggaggatgaggaggtggatgtgacctctgtt
gaccccatcgttgcattctgcagcagtgatgaggagctggaggacttcaaggccctgctc
tacctgcccatcgctccagaggtagaagaccctgaggagaatccatttggtccccctccg
gatgcagccggccagaccacccccgtagaagatggttcagcccacacaggtagtggggac
aagaagcgccagccgtcctcagagggagttccgcccaaaaagaaggctcgtaccaccacc
atcgaactacagggggtgcctagtgatgaggtgcaccccttactgggggtaaagggagac
agcaagtccaagaagaagacggcagggcggccaaaaggctccaaaggtaaagagaaagac
tttcccttcaggcccaaaccctacaggggggacagggtctaccctgacggagcggtagcg
ggaggaggagcaggaggaggaggaggaggaggagggatgaagggcagagcggaggggggc
ctgactgcagcagggagcctggtttcacagtcctacaagcagcatgatatcgggggactg
gactga
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